RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 DCAF13Q9NV06 445 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GPR83Q9NYM4 423 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 TBX20Q9UMR3 447 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CHST2Q9Y4C5 530 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CHD5Q8TDI0 1954 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 LOC105369274A0A096LPK9 316 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 NCF1BA6NI72 391 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 NCF1CA8MVU1 366 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MID1O15344 667 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 SIGLEC5O15389 551 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR10H2O60403 315 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TSPAN2O60636 221 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 KERAO60938 352 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 AP2A2O94973 939 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TRUB2O95900 331 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 GUSBP08236 651 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 HOXB5P09067 269 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MMP10P09238 476 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF888P0CJ79 500 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 C6P13671 934 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 HOXA5P20719 270 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PRPS1L1P21108 318 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PTPN3P26045 913 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MST1P26927 711 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MC3RP41968 323 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CDKN1BP46527 198 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PRKXP51817 358 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 KCNMB1Q16558 191 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ST3GAL2Q16842 350 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF630Q2M218 657 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 NDUFAF6Q330K2 333 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 SPDYE7PQ495Y7 208 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ASPRV1Q53RT3 343 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 XKR4Q5GH76 650 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 GCNT6Q5T4J0 391 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 LIPKQ5VXJ0 399 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 AFMIDQ63HM1 303 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR2T5Q6IEZ7 315 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TPRA1Q86W33 373 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM131BQ86XD5 332 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR4N4Q8N0Y3 316 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF548Q8NEK5 533 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR10A7Q8NGE5 316 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR8J2Q8NGG1 315 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR56B2PQ8NGI1 322 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR5AN1Q8NGI8 311 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR2T29Q8NH02 315 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR56B4Q8NH76 319 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ATXN7L3BQ96GX2 97 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 KCTD7Q96MP8 289 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 DMRTA2Q96SC8 542 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 SYT3Q9BQG1 590 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TMED9Q9BVK6 235 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TRIM2Q9C040 744 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CHST5Q9GZS9 411 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ST6GALNAC4Q9H4F1 302 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 GREM2Q9H772 168 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM138Q9NPI0 162 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ELOVL2Q9NXB9 296 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 GAR1Q9NY12 217 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MRPS18CQ9Y3D5 142 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 FRMPD3Q5JV73 1810 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 FOCADQ5VW36 1801 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CASP8AP2Q9UKL3 1982 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 LOC285095A0A1B0GVY8 99 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 A0A1W2PN81 502 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 AGAP14A8MT82 685 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 H7C4K7 107 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CXCR6O00574 342 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 HYAL3O43820 417 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 FZD7O75084 574 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ATP6AP2O75787 350 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 FGF19O95750 216 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 METTL15P1P0C7V9 234 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PKMP14618 531 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ARSAP15289 507 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 NQO2P16083 231 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TBXA2RP21731 343 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TACR3P29371 465 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC6A4P31645 630 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 BTCP35070 178 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CHRNA7P36544 502 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 BDKRB1P46663 353 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CDX1P47902 265 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 POLR2JP52435 117 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CRISP3P54108 245 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 SESN2P58004 480 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 DYNLL1P63167 89 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 BLOC1S1P78537 153 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 SIGLEC14Q08ET2 396 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 C3orf36Q3SXR2 165 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CHRFAM7AQ494W8 412 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 GXYLT1Q4G148 440 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 C9orf64Q5T6V5 341 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PLAG1Q6DJT9 500 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 USP17L6PQ6QN14 398 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 DEF8Q6ZN54 512 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CXXC5Q7LFL8 322 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM135Q86UB9 458 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 IQCHQ86VS3 1027 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 346.6 ms