RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 MCCC2Q9HCC0 563 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 AIG1Q9NVV5 245 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 GPATCH2Q9NW75 528 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 KCNN3Q9UGI6 736 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 MCTS1Q9ULC4 181 aaKnown RBP10.41□□□□□ -0.74
CPNE1-222ENST00000473373 CARD8Q9Y2G2 431 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 AP4B1Q9Y6B7 739 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 KCNE3Q9Y6H6 103 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 CSMD2Q7Z408 3487 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 ADGRG4Q8IZF6 3080 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 TUBAL3A6NHL2 446 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 UBDO15205 165 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 SNNO75324 88 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-222ENST00000473373 RCBTB2O95199 551 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 IL18BPO95998 194 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 PGRP06401 933 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 ALDOCP09972 364 aaKnown RBP10.4□□□□□ -0.74
CPNE1-222ENST00000473373 UBL4AP11441 157 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 FCGR2AP12318 317 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 ZNF17P17021 662 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 SFTPDP35247 375 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 P2RX1P51575 399 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 CTBP2P56545 445 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 CLDN15P56746 228 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 CLDN20P56880 219 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 B3GALT5-AS1P59052 145 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 EEF1A1P68104 462 aaKnown RBP10.4□□□□□ -0.74
CPNE1-222ENST00000473373 LRRC74AQ0VAA2 488 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 PON3Q15166 354 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 PDZK1Q5T2W1 519 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 EEF1A1P5Q5VTE0 462 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 OGFOD2Q6N063 350 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 DNAJC14Q6Y2X3 702 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-222ENST00000473373 GLB1L3Q8NCI6 653 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-222ENST00000473373 TOR1AIP2Q8NFQ8 470 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 FAM110BQ8TC76 370 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 HOXB13Q92826 284 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-222ENST00000473373 RAB8BQ92930 207 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 SDF2Q99470 211 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 PIGMQ9H3S5 423 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 RMND5AQ9H871 391 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 MED17Q9NVC6 651 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 CLCF1Q9UBD9 225 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 PACSIN3Q9UKS6 424 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 MKLN1Q9UL63 735 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 WDR45Q9Y484 360 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 DTNAQ9Y4J8 743 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 C2CD3Q4AC94 2353 aa10.4□□□□□ -0.74
CPNE1-222ENST00000473373 CELSR1Q9NYQ6 3014 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 IGLV3-32A0A0A0MS00 114 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 TMEM247A6NEH6 219 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 CCDC154A6NI56 674 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 GJE1A6NN92 205 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 HMGB1P1B2RPK0 211 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 H0YC42 278 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 RFXANKO14593 260 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 TNFSF11O14788 317 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 CASKO14936 926 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 ZNF264O43296 627 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 TNFRSF21O75509 655 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 SLC22A3O75751 556 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 CSTAP01040 98 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 GSNP06396 782 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 CAPN3P20807 821 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 EIF1P41567 113 aaKnown RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 SUCLG1P53597 346 aaKnown RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 TPD52P55327 224 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 ZNF117Q03924 483 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 FOXF2Q12947 444 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 CBFBQ13951 182 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 CD226Q15762 336 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 GSTA3Q16772 222 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 PLPPR5Q32ZL2 321 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 NDUFAF6Q330K2 333 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 ARHGAP11BQ3KRB8 267 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 SLC9B1Q4ZJI4 515 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 C6orf10Q5SRN2 563 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 HBMQ6B0K9 141 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 POMZP3Q6PJE2 187 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 ZNF295-AS1Q8N0V1 137 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 MIER2Q8N344 545 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 ZNF563Q8TA94 476 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 PNPT1Q8TCS8 783 aaKnown RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 ACTRT2Q8TDY3 377 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 ZNF845Q96IR2 970 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 POLDIP3Q9BY77 421 aaKnown RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 TIGARQ9NQ88 270 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 INTS9Q9NV88 658 aaKnown RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 PAQR5Q9NXK6 330 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 USH1CQ9Y6N9 552 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 SETD2Q9BYW2 2564 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-222ENST00000473373 TACC2O95359 2948 aa10.39□□□□□ -0.75
CPNE1-222ENST00000473373 F8P00451 2351 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 HIVEP1P15822 2718 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 B4DXG7 233 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 SYT5O00445 386 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 CXCL13O43927 109 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 KRT75O95678 551 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 TGM6O95932 706 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 IL6P05231 212 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms