RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ADORA2A-AS1P86434 159 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 SELPLGQ14242 412 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 CDSNQ15517 529 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 GPR68Q15743 365 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 GXYLT1Q4G148 440 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 FLYWCH1Q4VC44 716 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 MTFR2Q6P444 385 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 CBLN3Q6UW01 205 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 C6orf89Q6UWU4 347 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 ARSKQ6UWY0 536 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 CCDC121Q6ZUS5 278 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 GDF7Q7Z4P5 450 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 YTHDF3Q7Z739 585 aaKnown RBP11.89□□□□□ -0.51
TPM3-216ENST00000473036 CCDC120Q96HB5 630 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 DMRTA2Q96SC8 542 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 TIMP4Q99727 224 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 UGT2B28Q9BY64 529 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 TBL1XR1Q9BZK7 514 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 SLC38A1Q9H2H9 487 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 LDAHQ9H6V9 325 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 PPP4R1LQ9P1A2 415 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 ARMCX1Q9P291 453 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 HIVEP1P15822 2718 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 LOC100653049A0A140TA62 436 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 CLDN24A6NM45 220 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 PRSS44E7EML9 344 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 CLIC1O00299 241 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 CCL21O00585 134 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 NDUFB5O43674 189 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 KIAA0513O60268 411 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 KRT34O76011 436 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 H6PDO95479 791 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 TFPTP0C1Z6 253 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 PPIBP23284 216 aaKnown RBP11.88□□□□□ -0.51
TPM3-216ENST00000473036 DPP4P27487 766 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 CLDN15P56746 228 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 TXNL4AP83876 142 aaKnown RBP11.88□□□□□ -0.51
TPM3-216ENST00000473036 ZNF117Q03924 483 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 TOMM20Q15388 145 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 ZNF141Q15928 474 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 TMEM44Q2T9K0 475 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.88□□□□□ -0.513e-17■□□□□ 10.2
TPM3-216ENST00000473036 NHSL2Q5HYW2 709 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 PDZK1Q5T2W1 519 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 VASNQ6EMK4 673 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 HACD2Q6Y1H2 254 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 SEM1Q6ZVN7 128 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 DPP10Q8N608 796 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 POC1BQ8TC44 478 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 C1GALT1C1Q96EU7 318 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 WDYHV1Q96HA8 205 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 SH3YL1Q96HL8 342 aaPredicted RBP11.88□□□□□ -0.51
TPM3-216ENST00000473036 HOPXQ9BPY8 73 aaPredicted RBP11.88□□□□□ -0.51
TPM3-216ENST00000473036 C1orf21Q9H246 121 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 TAS2R10Q9NYW0 307 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 B4GALT7Q9UBV7 327 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 CORO2BQ9UQ03 480 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 RPH3AQ9Y2J0 694 aaPredicted RBP11.88□□□□□ -0.51
TPM3-216ENST00000473036 MEMO1Q9Y316 297 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 MRPS18CQ9Y3D5 142 aaKnown RBP11.88□□□□□ -0.51
TPM3-216ENST00000473036 FAM215AQ9Y5M1 114 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 GMEB1Q9Y692 573 aa11.88□□□□□ -0.51
TPM3-216ENST00000473036 C15orf38-AP3S2A0A0A6YYH1 394 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 OR14I1A6ND48 311 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 SCDO00767 359 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 ZG16O60844 167 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 ADAM11O75078 769 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 STX11O75558 287 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 ANP32DO95626 131 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 KRT75O95678 551 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 GUSBP08236 651 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 ATP6V1C1P21283 382 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 STARP49675 285 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 ANXA11P50995 505 aaKnown RBP11.87□□□□□ -0.51
TPM3-216ENST00000473036 DSCR4P56555 118 aaPredicted RBP11.87□□□□□ -0.51
TPM3-216ENST00000473036 RBPJQ06330 500 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 C17orf67Q0P5P2 114 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 RGNQ15493 299 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 TOMM34Q15785 309 aaPredicted RBP11.87□□□□□ -0.51
TPM3-216ENST00000473036 RUNDC3AQ59EK9 446 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 PLXDC2Q6UX71 529 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 C16orf62Q7Z3J2 963 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 ARPINQ7Z6K5 226 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 SNX32Q86XE0 403 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 TREML1Q86YW5 311 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 OR4K17Q8NGC6 315 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 SLC38A5Q8WUX1 472 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 MAL2Q969L2 176 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 CPPED1Q9BRF8 314 aaPredicted RBP11.87□□□□□ -0.51
TPM3-216ENST00000473036 PRDM14Q9GZV8 571 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 RAD21L1Q9H4I0 556 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 EXD2Q9NVH0 621 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 ICAM5Q9UMF0 924 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 CARD8Q9Y2G2 431 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 CHST2Q9Y4C5 530 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 DTNAQ9Y4J8 743 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 PCDHGB3Q9Y5G1 929 aa11.87□□□□□ -0.51
TPM3-216ENST00000473036 ZFHX3Q15911 3703 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 DOCK7Q96N67 2140 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 CACNA1CQ13936 2221 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms