RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ABHD16AO95870 558 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 DCTP40126 519 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 PITPNBP48739 271 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 ATP1B3P54709 279 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 DCDC1P59894 354 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 SNRPD2P62316 118 aaKnown RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 KCNJ11Q14654 390 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 ZMAT1Q5H9K5 638 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 XKRXQ6PP77 449 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 KMT5CQ86Y97 462 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 MISPQ8IVT2 679 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 CCDC71LQ8N9Z2 235 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 TREX2Q9BQ50 279 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 CPPED1Q9BRF8 314 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 WDR12Q9GZL7 423 aaKnown RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 MED11Q9P086 117 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 TRAPPC2LQ9UL33 140 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 RAB26Q9ULW5 256 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 CXorf49A8MYA2 514 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 LY86O95711 162 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 IFNA17P01571 189 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 CD1DP15813 335 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 SEC61A1P61619 476 aaKnown RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 PLEKHN1Q494U1 663 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 NKAIN1Q4KMZ8 207 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 NADSYN1Q6IA69 706 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 NLRC3Q7RTR2 1065 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 TECPR1Q7Z6L1 1165 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 ZNF695Q8IW36 515 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 SDSLQ96GA7 329 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 GFOD1Q9NXC2 390 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 MYOTQ9UBF9 498 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 BAIAP2Q9UQB8 552 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 PRAMEF25A6NGN4 478 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 TOR1BO14657 336 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 LSM1O15116 133 aaKnown RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 BCAS1O75363 584 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 PRSS56P0CW18 603 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 RAB3AP20336 220 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 EIF2DP41214 584 aaKnown RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 HOXA1P49639 335 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 ALKBH6Q3KRA9 238 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 SLC27A4Q6P1M0 643 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 RSPO2Q6UXX9 243 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 FAM57BQ71RH2 274 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 TRILQ7L0X0 811 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 PIWIL3Q7Z3Z3 882 aaKnown RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 COMMD6Q7Z4G1 85 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 GPR26Q8NDV2 337 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 OR6Q1Q8NGQ2 317 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 OR5H2Q8NGV7 314 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 FCGR1BQ92637 280 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 HTRA1Q92743 480 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 S100A14Q9HCY8 104 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 GNG12Q9UBI6 72 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 AJAP1Q9UKB5 411 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 STYXL1Q9Y6J8 313 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 MT-ND2P03891 347 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 RAB13P51153 203 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 FADDQ13158 208 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 EDDM3AQ14507 147 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 RPS26P11Q5JNZ5 115 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 ATG9BQ674R7 924 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 ZNF551Q7Z340 670 aaPredicted RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 SCD5Q86SK9 330 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 PM20D2Q8IYS1 436 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 C3orf58Q8NDZ4 430 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 TMEM185AQ8NFB2 350 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 KAT8Q9H7Z6 458 aaKnown RBP8.05□□□□□ -1.12
CD47-204ENST00000471694 VRTNQ9H8Y1 702 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 PRDM9Q9NQV7 894 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 ONECUT1Q9UBC0 465 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 PCDHGA1Q9Y5H4 931 aa8.05□□□□□ -1.12
CD47-204ENST00000471694 TRMUO75648 421 aaKnown RBP8.04□□□□□ -1.12
CD47-204ENST00000471694 NXPH2O95156 264 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 C8BP07358 591 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 C1SP09871 688 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 C17orf67Q0P5P2 114 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 SQSTM1Q13501 440 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 IQCKQ8N0W5 287 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 FBXO17Q96EF6 278 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 ZNF583Q96ND8 569 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 BTBD2Q9BX70 525 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 SIX2Q9NPC8 291 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 DMRT3Q9NQL9 472 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 PHRF1Q9P1Y6 1649 aaKnown RBP8.04□□□□□ -1.12
CD47-204ENST00000471694 MYH1P12882 1939 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 ITM2AO43736 263 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 CACNG3O60359 315 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 RFC3P40938 356 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 NR1H2P55055 460 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 ADAM15Q13444 863 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 WBP2NLQ6ICG8 309 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 OR5K2Q8NHB8 316 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 YBX2Q9Y2T7 364 aaKnown RBP8.04□□□□□ -1.12
CD47-204ENST00000471694 CHD2O14647 1828 aaKnown RBP8.04□□□□□ -1.12
CD47-204ENST00000471694 B4DXG7 233 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 ADAP00813 363 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 BMP6P22004 513 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 UGT2B10P36537 528 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms