RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 FRS3O43559 492 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 OR6B1O95007 311 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 CCNB2O95067 398 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 OR5F1O95221 314 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 GKN3PP0CG01 181 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 PGCP20142 388 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 PEX2P28328 305 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 IFNGR2P38484 337 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 MASP1P48740 699 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 HLCSP50747 726 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 Q0VFX4 171 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 SNTA1Q13424 505 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 CBFBQ13951 182 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 TRAM2Q15035 370 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 DEFB109BQ30KR1 87 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 ZNF791Q3KP31 576 aaPredicted RBP8.95□□□□□ -0.98
CCM2-204ENST00000470837 ENTPD8Q5MY95 495 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 DCST1Q5T197 706 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 OTUD3Q5T2D3 398 aaPredicted RBP8.95□□□□□ -0.98
CCM2-204ENST00000470837 ATP1A1-AS1Q5TC04 95 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 SLC22A10Q63ZE4 541 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 LPCAT4Q643R3 524 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 B3GNTL1Q67FW5 361 aaPredicted RBP8.95□□□□□ -0.98
CCM2-204ENST00000470837 HMBOX1Q6NT76 420 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 H3F3CQ6NXT2 135 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 SLC30A6Q6NXT4 461 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 SHQ1Q6PI26 577 aaKnown RBP8.95□□□□□ -0.98
CCM2-204ENST00000470837 CCDC81Q6ZN84 652 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 STK32CQ86UX6 486 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 PACS2Q86VP3 889 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 CYP4Z2PQ8N1L4 340 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 ARMC10Q8N2F6 343 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 CADM2Q8N3J6 435 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 LINC00471Q8N535 108 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 PACRGLQ8N7B6 248 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 ATG16L2Q8NAA4 619 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 POGLUT1Q8NBL1 392 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 OR10G3Q8NGC4 313 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 B4GALNT2Q8NHY0 566 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 HGDQ93099 445 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 SLC38A4Q969I6 547 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 NRBF2Q96F24 287 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 SH3YL1Q96HL8 342 aaPredicted RBP8.95□□□□□ -0.98
CCM2-204ENST00000470837 TACO1Q9BSH4 297 aaKnown RBP8.95□□□□□ -0.98
CCM2-204ENST00000470837 OSBPL11Q9BXB4 747 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 PTGES2Q9H7Z7 377 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 ZNF556Q9HAH1 456 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 NMNAT1Q9HAN9 279 aaPredicted RBP8.95□□□□□ -0.98
CCM2-204ENST00000470837 TIMMDC1Q9NPL8 285 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 CTPS2Q9NRF8 586 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 GPR83Q9NYM4 423 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 FLRT3Q9NZU0 649 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 RHCGQ9UBD6 479 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 PRDM4Q9UKN5 801 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 OAZ3Q9UMX2 235 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 CARD8Q9Y2G2 431 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 AHCTF1Q8WYP5 2266 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 A0A1W2PRQ8 180 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 J3KTA2 159 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 FAAHO00519 579 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 PEX1O43933 1283 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 FADS1O60427 444 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 TPST2O60704 377 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 SNX4O95219 450 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 THRBP10828 461 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 GP1BBP13224 206 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 CDH2P19022 906 aaPredicted RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 MSX1P28360 303 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 GCKP35557 465 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 HSPA13P48723 471 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 P2RX1P51575 399 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 CCL11P51671 97 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 ZNF41P51814 821 aaPredicted RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 SUMO3P55854 103 aaPredicted RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 HOXC5Q00444 222 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 EPS8Q12929 822 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 PIN1Q13526 163 aaPredicted RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 DGCR6Q14129 220 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 OR1Q1Q15612 314 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 OGFRL1Q5TC84 451 aaPredicted RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 WBP2NLQ6ICG8 309 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 ZNF613Q6PF04 617 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 ISLR2Q6UXK2 745 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 ZNF730Q6ZMV8 503 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 LINC00696Q6ZRV3 163 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 RBM45Q8IUH3 476 aaKnown RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 LACC1Q8IV20 430 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 OFCC1Q8IZS5 231 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 BEST3Q8N1M1 668 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 CBR4Q8N4T8 237 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 AMER2Q8N7J2 671 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 OR4K17Q8NGC6 315 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 OR5W2Q8NH69 310 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 ADAMTS16Q8TE57 1224 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 GRHL3Q8TE85 626 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 GIPC3Q8TF64 312 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 DUSP19Q8WTR2 217 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 DNAJA4Q8WW22 397 aaPredicted RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 APOBEC4Q8WW27 367 aaKnown RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 TMEM234Q8WY98 164 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms