RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 GPR55Q9Y2T6 319 aaPredicted RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 EXOSC1Q9Y3B2 195 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 SESN1Q9Y6P5 492 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 FXYD6-FXYD2A0A087WZ82 144 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 ANTXRLA6NF34 631 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 H7C4K7 107 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 PPM1DO15297 605 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 RGS9O75916 674 aaPredicted RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 FGF2P09038 288 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 GABRR2P28476 465 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 GDNFP39905 211 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 MAGEB1P43366 347 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 RPE65Q16518 533 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 SLCO4C1Q6ZQN7 724 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 TRMT11Q7Z4G4 463 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 C6orf120Q7Z4R8 191 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 RASGRP3Q8IV61 690 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 IL17RCQ8NAC3 791 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 C2CD4CQ8TF44 421 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 NARS2Q96I59 477 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 TEFMQ96QE5 360 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 ENKD1Q9H0I2 346 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 FXYD6Q9H0Q3 95 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 WDR26Q9H7D7 661 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 SPG21Q9NZD8 308 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 PHF11Q9UIL8 331 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 OR6C75A6NL08 312 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 FAM170BA6NMN3 283 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 MCRIP1C9JLW8 97 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 INPPL1O15357 1258 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 TSPAN6O43657 245 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 SELENOFO60613 162 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 EFCAB14O75071 495 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 ATG12O94817 140 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 GNRH1P01148 92 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 RLN2P04090 185 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 CBSLP0DN79 551 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 ATP1B2P14415 290 aaPredicted RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 RAB3AP20336 220 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 CBSP35520 551 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 SLC16A1P53985 500 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 MANFP55145 182 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 Q3ZCU0 254 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 CLLU1OSQ5K130 101 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 STPG1Q5TH74 334 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 HIST2H2AA3Q6FI13 130 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 ELP2Q6IA86 826 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 SLC39A5Q6ZMH5 540 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 RFLNBQ8N5W9 214 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 OR5M1Q8NGP8 315 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 SLC38A3Q99624 504 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 ELAC1Q9H777 363 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 EXOSC3Q9NQT5 275 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 MRPS23Q9Y3D9 190 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 ASB4Q9Y574 426 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 SCN2AQ99250 2005 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 SZT2Q5T011 3432 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 OR6C74A6NCV1 312 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 GLOD5A6NK44 160 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 LINC00587B1AMM8 73 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 CLUP10909 449 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 NFYAP23511 347 aaPredicted RBP7.41□□□□□ -1.22
TPM3-215ENST00000469717 PTBP1P26599 531 aaKnown RBP eCLIP7.41□□□□□ -1.222e-9■■■■■ 36.6
TPM3-215ENST00000469717 MST1P26927 711 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 CCR8P51685 355 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 HCCSP53701 268 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 CLDN12P56749 244 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 TBPL1P62380 186 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 DEFB103AP81534 67 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 PDE7AQ13946 482 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 GPR33Q49SQ1 333 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 ADGRF1Q5T601 910 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 PYHIN1Q6K0P9 492 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 MED27Q6P2C8 311 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 PLBD1Q6P4A8 553 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 TAS1R1Q7RTX1 841 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 TMEM173Q86WV6 379 aaPredicted RBP7.41□□□□□ -1.22
TPM3-215ENST00000469717 NPAS4Q8IUM7 802 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 C12orf76Q8N812 135 aaPredicted RBP7.41□□□□□ -1.22
TPM3-215ENST00000469717 POGLUT1Q8NBL1 392 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 STK35Q8TDR2 534 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 DERL3Q96Q80 235 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 FKRPQ9H9S5 495 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 DPP7Q9UHL4 492 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 NPTNQ9Y639 398 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 CNOT1A5YKK6 2376 aaKnown RBP7.41□□□□□ -1.22
TPM3-215ENST00000469717 MYO15AQ9UKN7 3530 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 A0A1W2PS29 197 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 SLC38A8A6NNN8 435 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 PRR23D1E9PI22 279 aaPredicted RBP7.41□□□□□ -1.22
TPM3-215ENST00000469717 PRR23D2P0DMB1 279 aaPredicted RBP7.41□□□□□ -1.22
TPM3-215ENST00000469717 KLF9Q13886 244 aaPredicted RBP7.41□□□□□ -1.22
TPM3-215ENST00000469717 HYAL4Q2M3T9 481 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 RTP2Q5QGT7 225 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 AADACL4Q5VUY2 407 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 C1orf94Q6P1W5 598 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 NKAIN4Q8IVV8 208 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 ZFP82Q8N141 532 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 OR10H4Q8NGA5 316 aa7.41□□□□□ -1.22
TPM3-215ENST00000469717 ZDHHC1Q8WTX9 485 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms