RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 PRTFDC1Q9NRG1 225 aa4.17□□□□□ -1.74
VPS8-219ENST00000469479 CLCF1Q9UBD9 225 aa4.17□□□□□ -1.74
VPS8-219ENST00000469479 ZNF148Q9UQR1 794 aa4.17□□□□□ -1.74
VPS8-219ENST00000469479 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.17□□□□□ -1.74
VPS8-219ENST00000469479 CHCHD2Q9Y6H1 151 aaPredicted RBP4.17□□□□□ -1.74
VPS8-219ENST00000469479 RAI1Q7Z5J4 1906 aaPredicted RBP4.17□□□□□ -1.74
VPS8-219ENST00000469479 IGHV4-30-2A0A087WSY4 118 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 A0A1B0GUV1 79 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 PABPN1LA6NDY0 278 aaKnown RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 OR51F1A6NGY5 319 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 SLC22A20A6NK97 555 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 OR6C76A6NM76 312 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 IQCF5A8MTL0 148 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 KDM4EB2RXH2 506 aaPredicted RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 E5RI56 91 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 TRIM77I1YAP6 450 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 GFYI3L273 518 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 AP3B1O00203 1094 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 PSTPIP1O43586 416 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 HCRTR2O43614 444 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 OR1F1O43749 312 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 SPOPO43791 374 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 SSX4O60224 188 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 PRKNO60260 465 aaPredicted RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 GPRIN2O60269 458 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 CTNSO60931 367 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 SERPINA6P08185 405 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 RHOXF2BP0C7M4 288 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 RBL1P28749 1068 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 COILP38432 576 aaPredicted RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 MSH2P43246 934 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 HNRNPH2P55795 449 aaKnown RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 RAB38P57729 211 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 FUT7Q11130 342 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 ASPHQ12797 758 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 STX4Q12846 297 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 RPS6KA2Q15349 733 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 TOMM20Q15388 145 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 BCL2A1Q16548 175 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 NTRK2Q16620 822 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 KBTBD12Q3ZCT8 623 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 ZNF672Q499Z4 452 aaPredicted RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 PIK3CD-AS1Q5SR53 167 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 AGAP6Q5VW22 663 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 LCTLQ6UWM7 567 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 MFSD7Q6UXD7 560 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 CLEC17AQ6ZS10 378 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 BBS12Q6ZW61 710 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 ZNF550Q7Z398 422 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 GPSM1Q86YR5 675 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 RCOR2Q8IZ40 523 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 GBP7Q8N8V2 638 aaPredicted RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 STEAP2Q8NFT2 490 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 TTLQ8NG68 377 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 OR4K1Q8NGD4 311 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 OR13J1Q8NGT2 312 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 SLC2A12Q8TD20 617 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 LKAAEAR1Q8TD35 194 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 UTP15Q8TED0 518 aaKnown RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 KAT2AQ92830 837 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 ANKRD9Q96BM1 317 aaPredicted RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 STARD4Q96DR4 205 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 ZC3HAV1LQ96H79 300 aaKnown RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 TMEM41AQ96HV5 264 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 CCDC138Q96M89 665 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 RILPQ96NA2 401 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 RUNDC3BQ96NL0 473 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 PIGQQ9BRB3 760 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 PELOQ9BRX2 385 aaKnown RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 HDHD5Q9BXW7 423 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 RHBGQ9H310 441 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 ACTR8Q9H981 624 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 CHODLQ9H9P2 273 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 LIN28AQ9H9Z2 209 aaKnown RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 ZNHIT6Q9NWK9 470 aaKnown RBP4.16□□□□□ -1.74
VPS8-219ENST00000469479 TAGLN3Q9UI15 199 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 KCNG2Q9UJ96 466 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 SLC6A5Q9Y345 797 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 ZNF175Q9Y473 711 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 MAD1L1Q9Y6D9 718 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 SPACA6W5XKT8 324 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 TENM3Q9P273 2699 aa4.16□□□□□ -1.74
VPS8-219ENST00000469479 FREM1Q5H8C1 2179 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 hCG_1818297A0A087WSY0 165 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 A0A087X0T9 212 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 LOC102723971A0A1B0GUV8 181 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 KRT87PA6NCN2 255 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 BTNL10A8MVZ5 291 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 C17orf105B2RV13 164 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 PLOD2O00469 737 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 ZNF354AO60765 605 aaPredicted RBP4.15□□□□□ -1.75
VPS8-219ENST00000469479 CBR3O75828 277 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 ACSL3O95573 720 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 SERPIND1P05546 499 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 SOD3P08294 240 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 FAM228BP0C875 321 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 MPC1LP0DKB6 136 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 CDH1P12830 882 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 TNNI3P19429 210 aa4.15□□□□□ -1.75
VPS8-219ENST00000469479 IMPA1P29218 277 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms