RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 FBXO27Q8NI29 283 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 PHOSPHO1Q8TCT1 267 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 ACTRT2Q8TDY3 377 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 JADE3Q92613 823 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 CDS1Q92903 461 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 PPCDCQ96CD2 204 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 CHMP6Q96FZ7 201 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 KLHL15Q96M94 604 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 TXLNGYQ9BZA5 131 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 ANKZF1Q9H8Y5 726 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 UBQLN4Q9NRR5 601 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 GLRX2Q9NS18 164 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 SIRT3Q9NTG7 399 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 C1orf109Q9NX04 203 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 NTMQ9P121 344 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 PSMC3IPQ9P2W1 217 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 GDF2Q9UK05 429 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 LIPT1Q9Y234 373 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 CARD8Q9Y2G2 431 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 WBP11Q9Y2W2 641 aaKnown RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 MAGED1Q9Y5V3 778 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 DPRXA6NFQ7 191 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 TTC36A6NLP5 189 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 TMEM233B4DJY2 109 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF195O14628 629 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 RAMP1O60894 148 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 SHBGP04278 402 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 NGFRP08138 427 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 ALOX5P09917 674 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 HPGDP15428 266 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 PRPH2P23942 346 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 FRKP42685 505 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-204ENST00000469207 DNAJB13P59910 316 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 RPL38P63173 70 aaKnown RBP10.9□□□□□ -0.66
HDAC3-204ENST00000469207 LASP1Q14847 261 aaKnown RBP10.9□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF239Q16600 458 aaKnown RBP10.9□□□□□ -0.66
HDAC3-204ENST00000469207 PGGHGQ32M88 737 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 GALNTL6Q49A17 601 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 VPS26BQ4G0F5 336 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 EXOSC6Q5RKV6 272 aaKnown RBP10.9□□□□□ -0.66
HDAC3-204ENST00000469207 TMEM201Q5SNT2 666 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 SFRP5Q5T4F7 317 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 TFAP2EQ6VUC0 442 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 TRABD2AQ86V40 505 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 COX18Q8N8Q8 333 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 KBTBD8Q8NFY9 601 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 OR6Y1Q8NGX8 325 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 SMAP2Q8WU79 429 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-204ENST00000469207 CCDC126Q96EE4 140 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 FAM120BQ96EK7 910 aaKnown RBP10.9□□□□□ -0.66
HDAC3-204ENST00000469207 REG4Q9BYZ8 158 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 OXSMQ9NWU1 459 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 PAQR5Q9NXK6 330 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-204ENST00000469207 PRSS50Q9UI38 385 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 ING1Q9UK53 422 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-204ENST00000469207 RNF115Q9Y4L5 304 aa10.9□□□□□ -0.66
HDAC3-204ENST00000469207 SONP18583 2426 aaKnown RBP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 A0A1W2PNR3 127 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 C7orf72A4D263 438 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 SMIM23A6NLE4 172 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 SLC28A1O00337 649 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 SCDO00767 359 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 AZIN1O14977 448 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 RGS14O43566 566 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 GPRIN2O60269 458 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 ADAM11O75078 769 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 GLRA3O75311 464 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 NUDT14O95848 222 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 IGHV4-39P01824 125 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 HMGN2P05204 90 aaKnown RBP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 IFI6P09912 130 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 CPA3P15088 417 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 ME2P23368 584 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 POU6F2P78424 691 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 BSPH1Q075Z2 132 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 PDE7AQ13946 482 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 PDSS1Q5T2R2 415 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 GTF2IRD2BQ6EKJ0 949 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 ADAM5Q6NVV9 412 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 SEZ6L2Q6UXD5 910 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 FCRLAQ7L513 359 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 OLIG3Q7RTU3 272 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 GTF2IRD2Q86UP8 949 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 C10orf107Q8IVU9 208 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 CCDC63Q8NA47 563 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 STEAP2Q8NFT2 490 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 OR7A2PQ8NGA2 310 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 SPATA3Q8NHX4 192 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 RFWD2Q8NHY2 731 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 RNF128Q8TEB7 428 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 FBXW5Q969U6 566 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 ZBED6CLQ96FA7 236 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 FCRL1Q96LA6 429 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 MS4A4EQ96PG1 132 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 RHOXF2Q9BQY4 288 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 TACO1Q9BSH4 297 aaKnown RBP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 REPIN1Q9BWE0 567 aaKnown RBP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 GATA5Q9BWX5 397 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 SLCO5A1Q9H2Y9 848 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms