RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 OMPP47874 163 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 GPR143P51810 404 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 COPZ1P61923 177 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 PLCXD2Q0VAA5 305 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 PMS2P3Q13401 168 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 EBPQ15125 230 aaKnown RBP8.62□□□□□ -1.03
SMC1A-205ENST00000469129 TBCEQ15813 527 aaPredicted RBP8.62□□□□□ -1.03
SMC1A-205ENST00000469129 NNATQ16517 81 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 PRAMEF17Q5VTA0 474 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 XAF1Q6GPH4 301 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 LAIR1Q6GTX8 287 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 PWWP2BQ6NUJ5 590 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 SLC27A4Q6P1M0 643 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 PRR23CQ6ZRP0 262 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 AHSA2Q719I0 299 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 ZAR1Q86SH2 424 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 NKAIN4Q8IVV8 208 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 NRMQ8IXM6 262 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 SLC34A3Q8N130 599 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 STX19Q8N4C7 294 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 LSMEM1Q8N8F7 131 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 OR4N2Q8NGD1 307 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 OR52L1Q8NGH7 329 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 STT3BQ8TCJ2 826 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 TMEM239Q8WW34 195 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 FAM46AQ96IP4 442 aaKnown RBP8.62□□□□□ -1.03
SMC1A-205ENST00000469129 GAL3ST4Q96RP7 486 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 BCL7BQ9BQE9 202 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 ARRDC1-AS1Q9H2J1 176 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 EXOSC3Q9NQT5 275 aaKnown RBP8.62□□□□□ -1.03
SMC1A-205ENST00000469129 UBQLN4Q9NRR5 601 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 MED17Q9NVC6 651 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 PAK1IP1Q9NWT1 392 aaPredicted RBP8.62□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF226Q9NYT6 803 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 CTSFQ9UBX1 484 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 GPN3Q9UHW5 284 aaPredicted RBP8.62□□□□□ -1.03
SMC1A-205ENST00000469129 PSORS1C1Q9UIG5 152 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 MED31Q9Y3C7 131 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 CDH10Q9Y6N8 788 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 PIEZO1Q92508 2521 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 ASCC3Q8N3C0 2202 aaKnown RBP8.62□□□□□ -1.03
SMC1A-205ENST00000469129 HEATR5AQ86XA9 2040 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 A0A1W2PQD3 144 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 OR2W5A6NFC9 320 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 UNC119BA6NIH7 251 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 IDSB3KWA1 339 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 C9J4A7 227 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 M0R3G1 203 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 ALOX12BO75342 701 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 MT-ND2P03891 347 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 TP53P04637 393 aaPredicted RBP8.61□□□□□ -1.03
SMC1A-205ENST00000469129 CDK1P06493 297 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 NGFRP08138 427 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 ATXN8OSP0DMR3 200 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 UBL4AP11441 157 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 PRG2P13727 222 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 FUT4P22083 530 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 CCKBRP32239 447 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 SLC6A8P48029 635 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 PCYT1AP49585 367 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 TMBIM6P55061 237 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 NRG3P56975 720 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 HOXC5Q00444 222 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 CDK5Q00535 292 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 PRKCDQ05655 676 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 GINS1Q14691 196 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 LPAL2Q16609 132 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 OCLNQ16625 522 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 SLC25A30Q5SVS4 291 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF385CQ66K41 422 aaPredicted RBP8.61□□□□□ -1.03
SMC1A-205ENST00000469129 ULK3Q6PHR2 472 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF620Q6ZNG0 422 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 ASCL5Q7RTU5 278 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 OVCH1Q7RTY7 1134 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 CCDC103Q8IW40 242 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 PRSS58Q8IYP2 241 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 POGLUT1Q8NBL1 392 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 FAM71CQ8NEG0 241 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 RNF217Q8TC41 542 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 FANK1Q8TC84 345 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 RAB2BQ8WUD1 216 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 TMEM255BQ8WV15 326 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 DNAJA4Q8WW22 397 aaPredicted RBP8.61□□□□□ -1.03
SMC1A-205ENST00000469129 CNOT9Q92600 299 aaKnown RBP8.61□□□□□ -1.03
SMC1A-205ENST00000469129 ADIPOR1Q96A54 375 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 TMIGD2Q96BF3 282 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 ISOC1Q96CN7 298 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 VMP1Q96GC9 406 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 PLEKHA8Q96JA3 519 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 LRFN5Q96NI6 719 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 SIGLEC11Q96RL6 698 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 PRSS27Q9BQR3 290 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 NUDT9Q9BW91 350 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 WWTR1Q9GZV5 400 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 RACGAP1Q9H0H5 632 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 NXF5Q9H1B4 397 aaKnown RBP8.61□□□□□ -1.03
SMC1A-205ENST00000469129 WDR54Q9H977 334 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 CNIH4Q9P003 139 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 ERVK-18Q9QC07 812 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms