RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 EXOSC6Q5RKV6 272 aaKnown RBP19.54■□□□□ 0.72
TTC28-204ENST00000468807 DCST2Q5T1A1 773 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 HBMQ6B0K9 141 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 ZBTB9Q96C00 473 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 COQ8BQ96D53 544 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 PIK3IP1Q96FE7 263 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 DUSP26Q9BV47 211 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 CENPHQ9H3R5 247 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 NEUROD4Q9HD90 331 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 A0A1W2PQD3 144 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 H3BNH8 94 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 ITM2AO43736 263 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 CCKARP32238 428 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 RAC1P63000 192 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 ZNF117Q03924 483 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 FOXF1Q12946 379 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 MAD2L1Q13257 205 aaPredicted RBP19.53■□□□□ 0.72
TTC28-204ENST00000468807 ANKRD34AQ69YU3 496 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 ESPNLQ6ZVH7 1005 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 OR2V1Q8NHB1 315 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 BHLHE41Q9C0J9 482 aaPredicted RBP19.53■□□□□ 0.72
TTC28-204ENST00000468807 ZNF395Q9H8N7 513 aaPredicted RBP19.53■□□□□ 0.72
TTC28-204ENST00000468807 GPATCH2Q9NW75 528 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 PAQR5Q9NXK6 330 aaPredicted RBP19.53■□□□□ 0.72
TTC28-204ENST00000468807 CARD8Q9Y2G2 431 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 KCNE3Q9Y6H6 103 aa19.53■□□□□ 0.72
TTC28-204ENST00000468807 C7orf72A4D263 438 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 GTPBP1O00178 669 aaKnown RBP19.52■□□□□ 0.72
TTC28-204ENST00000468807 IL11P20809 199 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 SFTPDP35247 375 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 RPS26P62854 115 aaKnown RBP19.52■□□□□ 0.72
TTC28-204ENST00000468807 ADAM8P78325 824 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 ZNF844Q08AG5 666 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 GUSBP1Q15486 140 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 CTU2Q2VPK5 515 aaKnown RBP19.52■□□□□ 0.72
TTC28-204ENST00000468807 PDSS1Q5T2R2 415 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 LILRA2Q8N149 483 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 TMCO5AQ8N6Q1 288 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 ZNF781Q8N8C0 355 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 OR5D16Q8NGK9 328 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 RFWD2Q8NHY2 731 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 PSMA8Q8TAA3 256 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 POC1BQ8TC44 478 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 SFXN5Q8TD22 340 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 MOAP1Q96BY2 351 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 GMPPAQ96IJ6 420 aaPredicted RBP19.52■□□□□ 0.72
TTC28-204ENST00000468807 ADGRG7Q96K78 797 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 OR7D2Q96RA2 312 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 TMEM109Q9BVC6 243 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 HOXD1Q9GZZ0 328 aa19.52■□□□□ 0.72
TTC28-204ENST00000468807 NOP53Q9NZM5 478 aaKnown RBP19.52■□□□□ 0.72
TTC28-204ENST00000468807 A0A0J9YW62 118 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 OIP5O43482 229 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 SERPINE1P05121 402 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 PSMA4P25789 261 aaKnown RBP19.51■□□□□ 0.71
TTC28-204ENST00000468807 EIF1P41567 113 aaKnown RBP19.51■□□□□ 0.71
TTC28-204ENST00000468807 ABCE1P61221 599 aaKnown RBP19.51■□□□□ 0.71
TTC28-204ENST00000468807 HBA1P69905 142 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 EMX2Q04743 252 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 NDUFAF6Q330K2 333 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 BHLHB9Q6PI77 547 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 CBLN3Q6UW01 205 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 MTERF4Q7Z6M4 381 aaKnown RBP19.51■□□□□ 0.71
TTC28-204ENST00000468807 RIMKLAQ8IXN7 391 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 ATP6V1C2Q8NEY4 427 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 OR6K3Q8NGY3 331 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 KLHL15Q96M94 604 aa19.51■□□□□ 0.71
TTC28-204ENST00000468807 NIPBLQ6KC79 2804 aaeCLIP19.51■□□□□ 0.71
TTC28-204ENST00000468807 ADAMDEC1O15204 470 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 SIAH2O43255 324 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 LINGO3P0C6S8 592 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 CD53P19397 219 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 CRYGSP22914 178 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 PCYT1AP49585 367 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 CLDN8P56748 225 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 CARD18P57730 90 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 KLHL26Q53HC5 615 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.5■□□□□ 0.71
TTC28-204ENST00000468807 OR4F3Q6IEY1 312 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 CLECL1Q8IZS7 167 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 CLEC4FQ8N1N0 589 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 MREGQ8N565 214 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 OSTF1Q92882 214 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 C12orf49Q9H741 205 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 AKTIPQ9H8T0 292 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 UBTD1Q9HAC8 227 aa19.5■□□□□ 0.71
TTC28-204ENST00000468807 RNF103-CHMP3A0A140T963 221 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 DEFB108AA8MXU0 73 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 SS18L1O75177 396 aaPredicted RBP19.49■□□□□ 0.71
TTC28-204ENST00000468807 SOX30O94993 753 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 MYZAPP0CAP1 466 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 SHC1P29353 583 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 P2RX1P51575 399 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 CCR4P51679 360 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 ATP12AP54707 1039 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 WFDC11Q8NEX6 87 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 OR4A15Q8NGL6 344 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 FBXO27Q8NI29 283 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 ROBO4Q8WZ75 1007 aa19.49■□□□□ 0.71
TTC28-204ENST00000468807 REXO5Q96IC2 774 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms