RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 CHRFAM7AQ494W8 412 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 VPS26BQ4G0F5 336 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 ANKRD26P1Q6NSI1 321 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 NOXRED1Q6NXP6 359 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 SYT10Q6XYQ8 523 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 TRIM46Q7Z4K8 759 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 LCA5Q86VQ0 697 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 MISPQ8IVT2 679 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 BANPQ8N9N5 519 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 CDRT4Q8N9R6 151 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 SLC16A11Q8NCK7 471 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 NUP43Q8NFH3 380 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 B4GALNT2Q8NHY0 566 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 KISS1RQ969F8 398 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-207ENST00000468385 CPNE4Q96A23 557 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-207ENST00000468385 CIDECQ96AQ7 238 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-207ENST00000468385 POTEKPQ9BYX7 375 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 GRIP2Q9C0E4 1043 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 NTMQ9P121 344 aa11.61□□□□□ -0.55
PTPN7-207ENST00000468385 IGHV4-30-2A0A087WSY4 118 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 A0A087WUV0 522 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-207ENST00000468385 A0A1W2PQD3 144 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 PDPK1O15530 556 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 ELK4P28324 431 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 GPC1P35052 558 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 ETF1P62495 437 aaKnown RBP11.6□□□□□ -0.55
PTPN7-207ENST00000468385 ITGADQ13349 1161 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 KIAA0040Q15053 153 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 P2RY6Q15077 328 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 DUSP5Q16690 384 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 ZNF385BQ569K4 471 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 EXOSC6Q5RKV6 272 aaKnown RBP11.6□□□□□ -0.55
PTPN7-207ENST00000468385 C6orf52Q5T4I8 152 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 FCRLAQ7L513 359 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 BHLHA15Q7RTS1 189 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-207ENST00000468385 DTX2Q86UW9 622 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 TDRPQ86YL5 185 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 OR6Y1Q8NGX8 325 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 CEP70Q8NHQ1 597 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 C16orf58Q96GQ5 468 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 REXO5Q96IC2 774 aaKnown RBP11.6□□□□□ -0.55
PTPN7-207ENST00000468385 HS6ST2Q96MM7 605 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 FMO2Q99518 471 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 TSPYL1Q9H0U9 437 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 COQ10BQ9H8M1 238 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 BARX1Q9HBU1 254 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-207ENST00000468385 GP6Q9HCN6 339 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 UBQLN4Q9NRR5 601 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 CISD1Q9NZ45 108 aaKnown RBP11.6□□□□□ -0.55
PTPN7-207ENST00000468385 CCL27Q9Y4X3 112 aa11.6□□□□□ -0.55
PTPN7-207ENST00000468385 EXOC1LA0A1B0GW35 172 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 SHISA9B4DS77 424 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 SCDO00767 359 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 PHF1O43189 567 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-207ENST00000468385 RAMP1O60894 148 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 PRKD3O94806 890 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 YES1P07947 543 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 HPGDP15428 266 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 LCN1P31025 176 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 EIF1P41567 113 aaKnown RBP11.59□□□□□ -0.55
PTPN7-207ENST00000468385 FRKP42685 505 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-207ENST00000468385 C21orf58P58505 322 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 ZNF117Q03924 483 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 CCNJQ5T5M9 372 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 FBXO27Q8NI29 283 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 OTUB1Q96FW1 271 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-207ENST00000468385 ZNF764Q96H86 408 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-207ENST00000468385 MS4A4EQ96PG1 132 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 USB1Q9BQ65 265 aaKnown RBP11.59□□□□□ -0.55
PTPN7-207ENST00000468385 ALG2Q9H553 416 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 TNFRSF12AQ9NP84 129 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 TIGARQ9NQ88 270 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 ING1Q9UK53 422 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-207ENST00000468385 B3GALT5Q9Y2C3 310 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 FREM1Q5H8C1 2179 aa11.59□□□□□ -0.55
PTPN7-207ENST00000468385 NPIPB8E9PQR5 432 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 G3V2L1 256 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 GOLGA8RI6L899 631 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 ZNF195O14628 629 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 OIP5O43482 229 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 SSX4O60224 188 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 TBX19O60806 448 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 LYZL6O75951 148 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 F12P00748 615 aaPredicted RBP11.58□□□□□ -0.56
PTPN7-207ENST00000468385 FESP07332 822 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 FAM157CP0CG43 387 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 PTNP21246 168 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 ENPP1P22413 925 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 PRPH2P23942 346 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 EDNRAP25101 427 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 CKAP4Q07065 602 aaKnown RBP11.58□□□□□ -0.56
PTPN7-207ENST00000468385 TMEM176BQ3YBM2 270 aaPredicted RBP11.58□□□□□ -0.56
PTPN7-207ENST00000468385 ZCCHC12Q6PEW1 402 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 CBLN3Q6UW01 205 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 Q6ZT83 130 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 SZRD1Q7Z422 152 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 C17orf53Q8N3J3 647 aaPredicted RBP11.58□□□□□ -0.56
PTPN7-207ENST00000468385 CCNYL1Q8N7R7 359 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 COX18Q8N8Q8 333 aa11.58□□□□□ -0.56
PTPN7-207ENST00000468385 OR10H5Q8NGA6 315 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms