RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 STX3Q13277 289 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 PLPPR5Q32ZL2 321 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 VPS37AQ8NEZ2 397 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 OR8J2Q8NGG1 315 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 NRGNQ92686 78 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 SH3YL1Q96HL8 342 aaPredicted RBP17.16■□□□□ 0.34
COL7A1-207ENST00000467985 SORT1Q99523 831 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 SLC39A3Q9BRY0 314 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 PCDHGB4Q9UN71 923 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 NF1P21359 2839 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 SHISA8B8ZZ34 492 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 RNASET2O00584 256 aaKnown RBP17.15■□□□□ 0.34
COL7A1-207ENST00000467985 AK1P00568 194 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 CD8BP10966 210 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 BGNP21810 368 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 DNASE1P24855 282 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 SOAT1P35610 550 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 EIF1AXP47813 144 aaKnown RBP17.15■□□□□ 0.34
COL7A1-207ENST00000467985 IST1P53990 364 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 ATP12AP54707 1039 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 SUMO3P55854 103 aaPredicted RBP17.15■□□□□ 0.34
COL7A1-207ENST00000467985 CD226Q15762 336 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 KLHL26Q53HC5 615 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 PDSS1Q5T2R2 415 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 ANXA8L1Q5VT79 327 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 OR5AK3PQ8NH89 298 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 PHOSPHO1Q8TCT1 267 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 NUDT8Q8WV74 236 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 ZNF845Q96IR2 970 aaPredicted RBP17.15■□□□□ 0.34
COL7A1-207ENST00000467985 PPP1R36Q96LQ0 422 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 RNF145Q96MT1 663 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 FOXC2Q99958 501 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 PRRG4Q9BZD6 226 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 DPY30Q9C005 99 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 C20orf27Q9GZN8 174 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 ELOVL5Q9NYP7 299 aa17.15■□□□□ 0.34
COL7A1-207ENST00000467985 MCTS1Q9ULC4 181 aaKnown RBP17.15■□□□□ 0.34
COL7A1-207ENST00000467985 CASKO14936 926 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 ADAMDEC1O15204 470 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 PSMA4P25789 261 aaKnown RBP17.14■□□□□ 0.33
COL7A1-207ENST00000467985 CD79BP40259 229 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 CLNS1AP54105 237 aaKnown RBP17.14■□□□□ 0.33
COL7A1-207ENST00000467985 ZNF117Q03924 483 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 DPY19L1Q2PZI1 675 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 ATG16L1Q676U5 607 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 OR4F3Q6IEY1 312 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 VWA1Q6PCB0 445 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 ESPNLQ6ZVH7 1005 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 FAM214BQ7L5A3 538 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 C6orf120Q7Z4R8 191 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 BTLAQ7Z6A9 289 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 OR10D3Q8NH80 312 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 TESCQ96BS2 214 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 OR7D2Q96RA2 312 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 EMC9Q9Y3B6 208 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 DTNAQ9Y4J8 743 aa17.14■□□□□ 0.33
COL7A1-207ENST00000467985 PRSS51A0A1B0GVH4 220 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 NPIPB9F8W1W9 429 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 GTPBP1O00178 669 aaKnown RBP17.13■□□□□ 0.33
COL7A1-207ENST00000467985 SYNGR4O95473 234 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 AGR2O95994 175 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 PLGP00747 810 aaPredicted RBP17.13■□□□□ 0.33
COL7A1-207ENST00000467985 LINGO3P0C6S8 592 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 LBPP18428 481 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 MATN1P21941 496 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 ELK4P28324 431 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 ADH6P28332 368 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 P2RX1P51575 399 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 SIRPAP78324 504 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 GUSBP1Q15486 140 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 CLECL1Q8IZS7 167 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 CHDHQ8NE62 594 aaPredicted RBP17.13■□□□□ 0.33
COL7A1-207ENST00000467985 OR2V1Q8NHB1 315 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 LRRC8CQ8TDW0 803 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 ADGRG7Q96K78 797 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 NUF2Q9BZD4 464 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 NMUR2Q9GZQ4 415 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 MEAF6Q9HAF1 191 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 GLRX2Q9NS18 164 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 ICAM5Q9UMF0 924 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 PROCRQ9UNN8 238 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 TESMINQ9Y4I5 508 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 KCNE3Q9Y6H6 103 aa17.13■□□□□ 0.33
COL7A1-207ENST00000467985 RNF103-CHMP3A0A140T963 221 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 GJE1A6NN92 205 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 AQP8O94778 261 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 NUDT14O95848 222 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 CGAP01215 116 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 BST1Q10588 318 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 CTU2Q2VPK5 515 aaKnown RBP17.12■□□□□ 0.33
COL7A1-207ENST00000467985 HBMQ6B0K9 141 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 OGFOD2Q6N063 350 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 PPP4R4Q6NUP7 873 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 ZNF474Q6S9Z5 364 aaPredicted RBP17.12■□□□□ 0.33
COL7A1-207ENST00000467985 LILRA2Q8N149 483 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 OR5D16Q8NGK9 328 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 OR4A15Q8NGL6 344 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 RAB3IL1Q8TBN0 382 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 MIPOL1Q8TD10 442 aa17.12■□□□□ 0.33
COL7A1-207ENST00000467985 GMPPAQ96IJ6 420 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms