RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 GABPB1Q06547 395 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 RGS1Q08116 209 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 CDH17Q12864 832 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 GPS1Q13098 491 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 CBX3Q13185 183 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 FHL3Q13643 280 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 CCNIQ14094 377 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 FRG1Q14331 258 aaKnown RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 LASP1Q14847 261 aaKnown RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 SLC18A3Q16572 532 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ZNF791Q3KP31 576 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 TTLL9Q3SXZ7 439 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 SPDYE7PQ495Y7 208 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 PIGGQ5H8A4 983 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 BEX5Q5H9J7 111 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 TSTD2Q5T7W7 516 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 DEPDC1Q5TB30 811 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ATPAF1Q5TC12 328 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 SFRP4Q6FHJ7 346 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ABLIM2Q6H8Q1 611 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ADAM5Q6NVV9 412 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 WDR93Q6P2C0 686 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 PPP1R21Q6ZMI0 780 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ZNF534Q76KX8 674 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 SZRD1Q7Z422 152 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 C17orf64Q86WR6 236 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ZNF595Q8IYB9 648 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 KATNAL2Q8IYT4 538 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 RCOR2Q8IZ40 523 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 TRIML2Q8N7C3 387 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 MAPK1IP1LQ8NDC0 245 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ABHD11Q8NFV4 315 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 OR14A16Q8NHC5 309 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 NUBPLQ8TB37 319 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 SLC22A8Q8TCC7 542 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 NT5CQ8TCD5 201 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 AGR3Q8TD06 166 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 WDYHV1Q96HA8 205 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ART5Q96L15 291 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ZNF597Q96LX8 424 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 OSBPL9Q96SU4 736 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 TUBA1CQ9BQE3 449 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 TBCDQ9BTW9 1192 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 CCDC106Q9BWC9 280 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 NPLQ9BXD5 320 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 HSD3B7Q9H2F3 369 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 MMADHCQ9H3L0 296 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 PRDM13Q9H4Q3 707 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ESRP2Q9H6T0 727 aaKnown RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 GALNT9Q9HCQ5 603 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 SEMA4BQ9NPR2 832 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 SNTG1Q9NSN8 517 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 ANO10Q9NW15 660 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 DNAJB11Q9UBS4 358 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 IL19Q9UHD0 177 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 CAMK2AQ9UQM7 478 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 RUVBL2Q9Y230 463 aaKnown RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 MRPS33Q9Y291 106 aaKnown RBP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTCD3-207ENST00000467273 KIAA1549Q9HCM3 1950 aa4.89□□□□□ -1.63
PTCD3-207ENST00000467273 NCKAP5O14513 1909 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 TRBC2A0A5B9 178 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 GAGE12BA1L429 117 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 GRID2IPA4D2P6 1211 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 GAGE12HA6NDE8 117 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 FRG2CA6NGY1 282 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 A8MUA0 341 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 KDM4EB2RXH2 506 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 EBAG9O00559 213 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 NDUFS4O43181 175 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 SPOPO43791 374 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 LCMT2O60294 686 aaKnown RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 PEX11AO75192 247 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 TRIM3O75382 744 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 NDUFS3O75489 264 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 NPPAP01160 153 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 ENO3P13929 434 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 ZNF10P21506 573 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 NR4A1P22736 598 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 IMPA1P29218 277 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 PRKAR1BP31321 381 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 UGT2B10P36537 528 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 PIGAP37287 484 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 COILP38432 576 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 SLC6A12P48065 614 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 CDK9P50750 372 aaKnown RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 CCR8P51685 355 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 CASP9P55211 416 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 DSCR9P59020 149 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 LOXL1Q08397 574 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-207ENST00000467273 BMPR2Q13873 1038 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 RCN2Q14257 317 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 FGFBP1Q14512 234 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 MORF4L2Q15014 288 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 TRADDQ15628 312 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 KLHL38Q2WGJ6 581 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 TMEM249Q2WGJ8 235 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 BEAN1Q3B7T3 259 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 OR2A2Q6IF42 318 aa4.88□□□□□ -1.63
PTCD3-207ENST00000467273 KLHL17Q6TDP4 642 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms