RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 PHOSPHO1Q8TCT1 267 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 LZICQ8WZA0 190 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 POP5Q969H6 163 aaKnown RBP12.12□□□□□ -0.47
PDCD11-202ENST00000466959 SCMH1Q96GD3 660 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 FRMD6Q96NE9 622 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 ARHGAP9Q9BRR9 750 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 RSPO3Q9BXY4 272 aaPredicted RBP12.12□□□□□ -0.47
PDCD11-202ENST00000466959 RTN4RQ9BZR6 473 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 GALNT9Q9HCQ5 603 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 SDHAF3Q9NRP4 125 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 BAG5Q9UL15 447 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 TP53TG5Q9Y2B4 290 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 KLF13Q9Y2Y9 288 aaPredicted RBP12.12□□□□□ -0.47
PDCD11-202ENST00000466959 CHST2Q9Y4C5 530 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 PCDHGB6Q9Y5F9 930 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 CSAG2Q9Y5P2 127 aa12.12□□□□□ -0.47
PDCD11-202ENST00000466959 CNTRLQ7Z7A1 2325 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 NINQ8N4C6 2090 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 TRAV17A0A0B4J275 112 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 TCRBV5S2A0A599 114 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 CDHR4A6H8M9 788 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 CLDN24A6NM45 220 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 K7EM74 188 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 GTPBP1O00178 669 aaKnown RBP12.11□□□□□ -0.47
PDCD11-202ENST00000466959 SUV39H1O43463 412 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 SNX4O95219 450 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 EPPINO95925 133 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 LGI1O95970 557 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 CSTAP01040 98 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 FESP07332 822 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 C8BP07358 591 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 FAM87AP0C7U9 286 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 CNR1P21554 472 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 CD97P48960 835 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 SELENOWP63302 87 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 PLAURQ03405 335 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 C17orf67Q0P5P2 114 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 ZNF766Q5HY98 468 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 CLIP4Q8N3C7 705 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 TMEM178AQ8NBL3 297 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 CATSPER1Q8NEC5 780 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 C9orf43Q8TAL5 461 aaPredicted RBP12.11□□□□□ -0.47
PDCD11-202ENST00000466959 CNOT9Q92600 299 aaKnown RBP12.11□□□□□ -0.47
PDCD11-202ENST00000466959 PROX1Q92786 737 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 SLC35B4Q969S0 331 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 TMEM41AQ96HV5 264 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 TPD52L3Q96J77 140 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 DOHHQ9BU89 302 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 HES7Q9BYE0 225 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 EVA1AQ9H8M9 152 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 KLHL28Q9NXS3 571 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 SLC13A4Q9UKG4 626 aa12.11□□□□□ -0.47
PDCD11-202ENST00000466959 UBR5O95071 2799 aaPredicted RBP12.1□□□□□ -0.47
PDCD11-202ENST00000466959 IGLV3-32A0A0A0MS00 114 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 A0A0G2JMM0 328 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 A0A1W2PPB8 328 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 A0A1W2PRS3 328 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 KIR3DP1A8MWS1 328 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 G3V3Y1 287 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 ZNF264O43296 627 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 OIP5O43482 229 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 EIF4E2O60573 245 aaKnown RBP12.1□□□□□ -0.47
PDCD11-202ENST00000466959 DPM1O60762 260 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 BCAS1O75363 584 aaPredicted RBP12.1□□□□□ -0.47
PDCD11-202ENST00000466959 TRIM3O75382 744 aaPredicted RBP12.1□□□□□ -0.47
PDCD11-202ENST00000466959 PRKD3O94806 890 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 ZNF117Q03924 483 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 SKP2Q13309 424 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 NRF1Q16656 503 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 NDUFAF6Q330K2 333 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 IFI44LQ53G44 452 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 ENPP6Q6UWR7 440 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 ASB18Q6ZVZ8 466 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 COMTD1Q86VU5 262 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 SPATA24Q86W54 205 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 ZNF440Q8IYI8 595 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 FAM86B1Q8N7N1 296 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 TOR1AIP2Q8NFQ8 470 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 OR2M7Q8NG81 312 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 OR10Q1Q8NGQ4 319 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 DUSP19Q8WTR2 217 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 PYURFQ96I23 114 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 HSH2DQ96JZ2 352 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 ZNF597Q96LX8 424 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 ARHGDIGQ99819 225 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 FAM173AQ9BQD7 235 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 LAT2Q9GZY6 243 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 EXOSC3Q9NQT5 275 aaKnown RBP12.1□□□□□ -0.47
PDCD11-202ENST00000466959 KLHL1Q9NR64 748 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 DEPPQ9NTK1 212 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 RLIMQ9NVW2 624 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 DNAJB12Q9NXW2 375 aaKnown RBP12.1□□□□□ -0.47
PDCD11-202ENST00000466959 PPP4R1LQ9P1A2 415 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 CARD8Q9Y2G2 431 aa12.1□□□□□ -0.47
PDCD11-202ENST00000466959 TCRBV3S1A0A5B6 114 aa12.09□□□□□ -0.47
PDCD11-202ENST00000466959 C17orf51A8MQB3 221 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms