RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PREBQ9HCU5 417 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 APMAPQ9HDC9 416 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 GNG13Q9P2W3 67 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 PRSS38A1L453 326 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 SLC9B1P1A6NJY1 282 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CEBPZOSA8MTT3 80 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 B4DXG7 233 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 FAM189A1O60320 539 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 SLC43A1O75387 559 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 ZFAND5O76080 213 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 ICAM2P13598 275 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 GNB3P16520 340 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 MTNR1AP48039 350 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 EFNA3P52797 238 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 GLO1Q04760 184 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 KCNAB2Q13303 367 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 IRF4Q15306 451 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 SPHARQ15513 63 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 FAM78AQ5JUQ0 283 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 C6orf132Q5T0Z8 1188 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 DCST2Q5T1A1 773 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 IER5LQ5T953 404 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 STEAP4Q687X5 459 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 TMEM184AQ6ZMB5 413 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 COMMD6Q7Z4G1 85 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 KIF18BQ86Y91 864 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 DNAJC22Q8N4W6 341 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 DCUN1D4Q92564 292 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CIDECQ96AQ7 238 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 SIGLEC10Q96LC7 697 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 RTP3Q9BQQ7 232 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CASC3O15234 703 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 TBX10O75333 385 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 ARHGEF15O94989 841 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 EDN1P05305 212 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 MTHFD2P13995 350 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 RPS2P15880 293 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 UGT2B7P16662 529 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CRHBPP24387 322 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 DNASE1P24855 282 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 ALDH3B1P43353 468 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 SNTB2Q13425 540 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 C18orf21Q32NC0 220 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 PCGF3Q3KNV8 242 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 RAB41Q5JT25 222 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 MPP7Q5T2T1 576 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CLECL1Q8IZS7 167 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 RDH10Q8IZV5 341 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 TP63Q9H3D4 680 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 VSX1Q9NZR4 365 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 LRIT1Q9P2V4 623 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 EMC9Q9Y3B6 208 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 PTGDR2Q9Y5Y4 395 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 PSAT1Q9Y617 370 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 TRAV18A0A075B6X5 111 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 H3BNC9 293 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 ZNF44P15621 663 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 XCR1P46094 333 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 RAB5BP61020 215 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 DYRK1AQ13627 763 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 LRRTM3Q86VH5 581 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 OR51D1Q8NGF3 324 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 HAVCR2Q8TDQ0 301 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 IL1F10Q8WWZ1 152 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 SNAPC3Q92966 411 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 UTP23Q9BRU9 249 aaKnown RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 SYNPO2LQ9H987 977 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 ZNF334Q9HCZ1 680 aaPredicted RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 INIPQ9NRY2 104 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 OR14J1Q9UGF5 321 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 hCG_1809904A0A1W2PP81 198 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 A0A1W2PPE2 198 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 A0A1W2PR64 198 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 A0A1W2PRV1 198 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 STSP08842 583 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 IL7P13232 177 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 MRPS21P82921 87 aaKnown RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 SLX4IPQ5VYV7 408 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 RTL6Q6ICC9 239 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 DPPA4Q7L190 304 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 MUS81Q96NY9 551 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 FAIMQ9NVQ4 179 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 C14orf119Q9NWQ9 140 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 GPR52Q9Y2T5 361 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 LAMB2P55268 1798 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 BRWD3Q6RI45 1802 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 XIRP1Q702N8 1843 aaKnown RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 A6NHS1 94 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 NKX6-3A6NJ46 265 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 EIF3FO00303 357 aaPredicted RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 OR2T1O43869 369 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 MRPL33O75394 65 aaKnown RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 SNAP29O95721 258 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 CD38P28907 300 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 SLC10A2Q12908 348 aaPredicted RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 HTR3DQ70Z44 454 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 OR52E1Q8NGJ3 308 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 OR1J2Q8NGS2 313 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 FAM174AQ8TBP5 190 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 C7orf50Q9BRJ6 194 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms