RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 PRRC2AP48634 2157 aaKnown RBP15.71■□□□□ 0.11
COL7A1-206ENST00000466591 NPIPA5A0A0B4J1W7 369 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 WDR91A4D1P6 747 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 NPIPA7E9PJI5 369 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 CYP7B1O75881 506 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 TUBBP07437 444 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 NPIPA8P0DM63 369 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 PPP3CBP16298 524 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 CD53P19397 219 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 SLC7A1P30825 629 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 PCYT1AP49585 367 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 VSNL1P62760 191 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 TMEM44Q2T9K0 475 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 C6orf136Q5SQH8 315 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 EMBQ6PCB8 327 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 BEND4Q6ZU67 534 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 ZAR1Q86SH2 424 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 OR5AK3PQ8NH89 298 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 FAM110BQ8TC76 370 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 HOXB13Q92826 284 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-206ENST00000466591 CAVIN3Q969G5 261 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 PPP1R36Q96LQ0 422 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 DUSP26Q9BV47 211 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 BHLHE41Q9C0J9 482 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-206ENST00000466591 ANKZF1Q9H8Y5 726 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 FBXO34Q9NWN3 711 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 CARD8Q9Y2G2 431 aa15.71■□□□□ 0.11
COL7A1-206ENST00000466591 C7orf72A4D263 438 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 SS18L1O75177 396 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-206ENST00000466591 BPGMP07738 259 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 MAP3K8P41279 467 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 SLC6A8P48029 635 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 P2RX1P51575 399 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 FOXF1Q12946 379 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 PDCD2Q16342 344 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-206ENST00000466591 ACKR1Q16570 336 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 UGT3A2Q3SY77 523 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 KRT71Q3SY84 523 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 XKR7Q5GH72 579 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 Q5PR19 223 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 C20orf204Q6ZNR8 217 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 BIVMQ86UB2 503 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 WFDC8Q8IUA0 241 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 KRTCAP2Q8N6L1 136 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 TOR1AIP2Q8NFQ8 470 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 SFXN5Q8TD22 340 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 OSTF1Q92882 214 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 CPNE4Q96A23 557 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-206ENST00000466591 C18orf12Q96KH6 178 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 TACO1Q9BSH4 297 aaKnown RBP15.7■□□□□ 0.1
COL7A1-206ENST00000466591 CXorf36Q9H7Y0 433 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 SIRT3Q9NTG7 399 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-206ENST00000466591 NOP53Q9NZM5 478 aaKnown RBP15.7■□□□□ 0.1
COL7A1-206ENST00000466591 ZDHHC2Q9UIJ5 367 aa15.7■□□□□ 0.1
COL7A1-206ENST00000466591 DUXAA6NLW8 204 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 DEFB108AA8MXU0 73 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 RGS16O15492 202 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-206ENST00000466591 CGAP01215 116 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 ELK4P28324 431 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 CCKARP32238 428 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 SUMO3P55854 103 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-206ENST00000466591 ZNF117Q03924 483 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 CD226Q15762 336 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 BEX5Q5H9J7 111 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 C16orf62Q7Z3J2 963 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 FBXO27Q8NI29 283 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 ROBO4Q8WZ75 1007 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 PERPQ96FX8 193 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 C3orf30Q96M34 536 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 GSX1Q9H4S2 264 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-206ENST00000466591 PLSCR4Q9NRQ2 329 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 GPC6Q9Y625 555 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-206ENST00000466591 ABCA4P78363 2273 aa15.69■□□□□ 0.1
COL7A1-206ENST00000466591 ITPR3Q14573 2671 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 A0A0J9YW62 118 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 ADAMDEC1O15204 470 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 G6PDP11413 515 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 UBL4AP11441 157 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 MATN1P21941 496 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 ATP12AP54707 1039 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 NR1H2P55055 460 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 CBFBQ13951 182 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 RNPS1Q15287 305 aaKnown RBP15.68■□□□□ 0.1
COL7A1-206ENST00000466591 ATAD3BQ5T9A4 648 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 VPS37AQ8NEZ2 397 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 OR4A15Q8NGL6 344 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 PKNOX2Q96KN3 472 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 SLC35G5Q96KT7 338 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 OR7D2Q96RA2 312 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 DPY30Q9C005 99 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 ACTR6Q9GZN1 396 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 EXD2Q9NVH0 621 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 DTNAQ9Y4J8 743 aa15.68■□□□□ 0.1
COL7A1-206ENST00000466591 RNF103-CHMP3A0A140T963 221 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 A0A1W2PPR1 153 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 FAM171A2A8MVW0 826 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 ZNF195O14628 629 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 INHBBP09529 407 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 LINGO3P0C6S8 592 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 MYZAPP0CAP1 466 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms