RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 NAXDQ8IW45 347 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 LRRC43Q8N309 656 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 ANKFN1Q8N957 763 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 OR52M1Q8NGK5 317 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 TYMSOSQ8TAI1 123 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 M1APQ8TC57 530 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 SLC5A11Q8WWX8 675 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 CTNNBL1Q8WYA6 563 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 FAM3CQ92520 227 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 SH3YL1Q96HL8 342 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 SIGLEC12Q96PQ1 595 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZSCAN5AQ9BUG6 496 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 TEX13BQ9BXU2 312 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 ELOVL3Q9HB03 270 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZNF221Q9UK13 617 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 RPH3ALQ9UNE2 315 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 MAD1L1Q9Y6D9 718 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 IGKV3D-20A0A0C4DH25 116 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 CLRN2A0PK11 232 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 BTN3A3O00478 584 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 OR7A17O14581 309 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 GLRA2P23416 452 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 PAX7P23759 505 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 NMT1P30419 496 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 MEOX2P50222 304 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 GBX2P52951 348 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 DSCR10P59022 87 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 EWSR1Q01844 656 aaKnown RBP eCLIP3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 RAB40BQ12829 278 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 GPM6BQ13491 265 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 LAGE3Q14657 143 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 SLC5A12Q1EHB4 618 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 CCDC152Q4G0S7 254 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 TMEM52BQ4KMG9 183 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 PAN3Q58A45 887 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 TTC23Q5W5X9 447 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 TMEM225Q6GV28 225 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 OR5M10Q6IEU7 315 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 UFSP1Q6NVU6 142 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 FBXL22Q6P050 247 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 VITQ6UXI7 678 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 C16orf62Q7Z3J2 963 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 P2RY8Q86VZ1 359 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 GPD1LQ8N335 351 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 GPR137CQ8N3F9 429 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 FAM133AQ8N9E0 248 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 KLHL30-AS1Q8NEE0 82 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 EMG1Q92979 244 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 ANKRD9Q96BM1 317 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 C12orf66Q96MD2 445 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 RIT2Q99578 217 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 PAXXQ9BUH6 204 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 TSSK1BQ9BXA7 367 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 CRNKL1Q9BZJ0 848 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 SPRR3Q9UBC9 169 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 TBK1Q9UHD2 729 aa3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZNF107Q9UII5 783 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-211ENST00000466538 GON4LQ3T8J9 2241 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 IGHV2-70DA0A0C4DH43 119 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 K7ENP7 123 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 LATO43561 262 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 EFNA2O43921 213 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 TSC22D2O75157 780 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 SCRG1O75711 98 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 F10P00742 488 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 PTBP1P26599 531 aaKnown RBP eCLIP3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 GDF1P27539 372 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 MDH2P40926 338 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 HNRNPA3P51991 378 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 GANABQ14697 944 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 PRR4Q16378 134 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 GSG1Q2KHT4 349 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZNF774Q6NX45 483 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 OR2T33Q8NG76 320 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 SMYD3Q9H7B4 428 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 GORASP2Q9H8Y8 452 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 CAB39LQ9H9S4 337 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 MIEF1Q9NQG6 463 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 NANSQ9NR45 359 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 PIPOXQ9P0Z9 390 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 ALG6Q9Y672 507 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 SLCO1B1Q9Y6L6 691 aa3.29□□□□□ -1.88
CDC42BPA-211ENST00000466538 IGLV8-61A0A075B6I0 122 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 A0A1W2PQ72 361 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 DHRS7CA6NNS2 312 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 PP2D1A8MPX8 630 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 STSP08842 583 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZNF44P15621 663 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 HNF1AP20823 631 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZP3P21754 424 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 CALB2P22676 271 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 UQCRC2P22695 453 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 FASP25445 335 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 PRKAR2BP31323 418 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 RPL29P47914 159 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 ACTR1AP61163 376 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 OC90Q02509 493 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 ST3GAL3Q11203 375 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 MXD4Q14582 209 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 PDK3Q15120 406 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms