RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 DDA1Q9BW61 102 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 C14orf105Q9NVL8 296 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 FBXO34Q9NWN3 711 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 CCDC59Q9P031 241 aaKnown RBP17.21■□□□□ 0.35
CAPN3-209ENST00000466222 FAM32AQ9Y421 112 aaKnown RBP17.21■□□□□ 0.35
CAPN3-209ENST00000466222 ENPP4Q9Y6X5 453 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 CEP250Q9BV73 2442 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 CFAP47Q6ZTR5 3102 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 GXYLT2A0PJZ3 443 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 GFRA3O60609 400 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 ALOX12BO75342 701 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 UMODP07911 640 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 RHCEP18577 417 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 TNFRSF1BP20333 461 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 RPS18P62269 152 aaKnown RBP17.21■□□□□ 0.35
CAPN3-209ENST00000466222 PSG6Q00889 435 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 ZNF155Q12901 538 aaPredicted RBP17.21■□□□□ 0.35
CAPN3-209ENST00000466222 ELAVL1Q15717 326 aaKnown RBP17.21■□□□□ 0.35
CAPN3-209ENST00000466222 KIF26BQ2KJY2 2108 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 AGAP7PQ5VUJ5 663 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 REEP3Q6NUK4 255 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 VSTM2LQ96N03 204 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 FOLH1BQ9HBA9 442 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 CNOT2Q9NZN8 540 aaKnown RBP17.21■□□□□ 0.35
CAPN3-209ENST00000466222 P2RX2Q9UBL9 471 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 PAIP2BQ9ULR5 123 aaKnown RBP17.21■□□□□ 0.35
CAPN3-209ENST00000466222 FER1L5A0AVI2 2057 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 TMEM247A6NEH6 219 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 METTL15A6NJ78 407 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 M0R082 166 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 SLITRK5O94991 958 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 CCNB2O95067 398 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 DLGAP3O95886 979 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 GABRA3P34903 492 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 LIPAP38571 399 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 MAP3K8P41279 467 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 SLC37A1P57057 533 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 CDC42P60953 191 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 EIF3IQ13347 325 aaKnown RBP17.2■□□□□ 0.34
CAPN3-209ENST00000466222 NCF4Q15080 339 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 GPAT3Q53EU6 434 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 EXOSC6Q5RKV6 272 aaKnown RBP17.2■□□□□ 0.34
CAPN3-209ENST00000466222 C6orf15Q6UXA7 325 aaPredicted RBP17.2■□□□□ 0.34
CAPN3-209ENST00000466222 NPSR1Q6W5P4 371 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 PLEKHG7Q6ZR37 379 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 ZNF367Q7RTV3 350 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 STX19Q8N4C7 294 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 GPR151Q8TDV0 419 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 ZNF721Q8TF20 911 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 NUDT9Q9BW91 350 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 NXF2Q9GZY0 626 aaKnown RBP17.2■□□□□ 0.34
CAPN3-209ENST00000466222 IMPAD1Q9NX62 359 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 DLL3Q9NYJ7 618 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 ZNF226Q9NYT6 803 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 GPN3Q9UHW5 284 aaPredicted RBP17.2■□□□□ 0.34
CAPN3-209ENST00000466222 PADI1Q9ULC6 663 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 PTRH2Q9Y3E5 179 aaKnown RBP17.2■□□□□ 0.34
CAPN3-209ENST00000466222 FAM186AA6NE01 2351 aa17.2■□□□□ 0.34
CAPN3-209ENST00000466222 EFCAB10A6NFE3 127 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 C5orf58C9J3I9 102 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 IGKV3-11P04433 115 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 CHRNEQ04844 493 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.19■□□□□ 0.34
CAPN3-209ENST00000466222 IRF3Q14653 427 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 FIGNL1Q6PIW4 674 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 CDRT4Q8N9R6 151 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 RPL3LQ92901 407 aaKnown RBP17.19■□□□□ 0.34
CAPN3-209ENST00000466222 ZPBPQ9BS86 351 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 UGT2A1Q9Y4X1 527 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 PCDHGA3Q9Y5H0 932 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 ZFHX4Q86UP3 3567 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 GADD45GO95257 159 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 CBLP22681 906 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 GALNSP34059 522 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 DUSP7Q16829 419 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 CCDC103Q8IW40 242 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 ZSCAN1Q8NBB4 408 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 PROX1Q92786 737 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 LMF1Q96S06 567 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 NIPSNAP1Q9BPW8 284 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 PELOQ9BRX2 385 aaKnown RBP17.19■□□□□ 0.34
CAPN3-209ENST00000466222 NRSN2Q9GZP1 204 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 SLC38A1Q9H2H9 487 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 PIGUQ9H490 435 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 SP140LQ9H930 580 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 ACER3Q9NUN7 267 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 MKLN1Q9UL63 735 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 ZNF451Q9Y4E5 1061 aa17.19■□□□□ 0.34
CAPN3-209ENST00000466222 ASNA1O43681 348 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 PRAMEF2O60811 474 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 IFNW1P05000 195 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 CT45A8P0DMV1 189 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 CT45A9P0DMV2 189 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 TCN2P20062 427 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 RFX3P48380 749 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 IDH2P48735 452 aaKnown RBP17.18■□□□□ 0.34
CAPN3-209ENST00000466222 RNF144AP50876 292 aaPredicted RBP17.18■□□□□ 0.34
CAPN3-209ENST00000466222 IFITM3Q01628 133 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 CDC20Q12834 499 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 BIKQ13323 160 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms