RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MANSC4A6NHS7 340 aaPredicted RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 SLC22A31A6NKX4 558 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 FAM183AA6NL82 134 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 ZNF749O43361 778 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 NDUFA2O43678 99 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 HRGP04196 525 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 PSMB1P20618 241 aaKnown RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 TRHRP34981 398 aaPredicted RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 AHRP35869 848 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 GDNFP39905 211 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 PRKAG1P54619 331 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 AP3S2P59780 193 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 CTAG1AP78358 180 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 REEP5Q00765 189 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 GRIN2CQ14957 1233 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 PRPF38BQ5VTL8 546 aaKnown RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 TCEAL8Q8IYN2 117 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 OR6V1Q8N148 313 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 OR11G2Q8NGC1 345 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 RIT1Q92963 219 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 PTP4A1Q93096 173 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 PMEPA1Q969W9 287 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 SAMD8Q96LT4 415 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 BBS4Q96RK4 519 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 C1QTNF2Q9BXJ5 285 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 GSDMCQ9BYG8 508 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 ZDHHC5Q9C0B5 715 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 CDCP1Q9H5V8 836 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 SAGE1Q9NXZ1 904 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 ING1Q9UK53 422 aaPredicted RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 THSD7BQ9C0I4 1608 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 B3GALNT1O75752 331 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 ASGR2P07307 311 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 TBXA2RP21731 343 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 DRD5P21918 477 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 CCR9P51686 369 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 NRG3P56975 720 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 RAP2BP61225 183 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 SLC3A1Q07837 685 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 ARHGAP19Q14CB8 494 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 ACSM3Q53FZ2 586 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 ARSIQ5FYB1 569 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 RNASE12Q5GAN4 147 aaKnown RBP18.37■□□□□ 0.53
SDF4-205ENST00000465727 B3GNTL1Q67FW5 361 aaPredicted RBP18.37■□□□□ 0.53
SDF4-205ENST00000465727 RNF180Q86T96 592 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 EID2Q8N6I1 236 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 OR10H4Q8NGA5 316 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 MOSPD2Q8NHP6 518 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 CAPNS2Q96L46 248 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 PGLYRP3Q96LB9 341 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 IL17FQ96PD4 163 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 QRSL1Q9H0R6 528 aaKnown RBP18.37■□□□□ 0.53
SDF4-205ENST00000465727 SLC38A1Q9H2H9 487 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 A0A0A6YYD5 115 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 KIAA0355O15063 1070 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 EPXP11678 715 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 SELPP16109 830 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 CALCRP30988 508 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 TPMTP51580 245 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 TGM3Q08188 693 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 RAB33AQ14088 237 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 OR52L1Q8NGH7 329 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 ELMOD3Q96FG2 381 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 SLC41A3Q96GZ6 507 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 IGSF21Q96ID5 467 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 TBX5Q99593 518 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 YIPF4Q9BSR8 244 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 PCBD2Q9H0N5 130 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 STARD7Q9NQZ5 370 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 TAC3Q9UHF0 121 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 BAIAP2Q9UQB8 552 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 ASF1AQ9Y294 204 aa18.37■□□□□ 0.53
SDF4-205ENST00000465727 GPR55Q9Y2T6 319 aaPredicted RBP18.37■□□□□ 0.53
SDF4-205ENST00000465727 FRS3O43559 492 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 ARL6IP5O75915 188 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 ALDOBP05062 364 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 ERGP11308 486 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 PRKACAP17612 351 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 ATF1P18846 271 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 NFYAP23511 347 aaPredicted RBP18.36■□□□□ 0.53
SDF4-205ENST00000465727 GABRR2P28476 465 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 RGS8P57771 180 aaPredicted RBP18.36■□□□□ 0.53
SDF4-205ENST00000465727 E2F1Q01094 437 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 ZNF805Q5CZA5 627 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 FAM46CQ5VWP2 391 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 DMKNQ6E0U4 476 aaPredicted RBP18.36■□□□□ 0.53
SDF4-205ENST00000465727 ASTLQ6HA08 431 aaPredicted RBP18.36■□□□□ 0.53
SDF4-205ENST00000465727 OR4C11Q6IEV9 310 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 GDF7Q7Z4P5 450 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 VRK2Q86Y07 508 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 DCUN1D3Q8IWE4 304 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 OR52H1Q8NGJ2 320 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 KISS1RQ969F8 398 aaPredicted RBP18.36■□□□□ 0.53
SDF4-205ENST00000465727 DPH7Q9BTV6 452 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 OR2AG1Q9H205 316 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 BRD7Q9NPI1 651 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 COL4A3Q01955 1670 aa18.36■□□□□ 0.53
SDF4-205ENST00000465727 CASP8AP2Q9UKL3 1982 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 E9PI62 339 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 MAN2B1O00754 1011 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms