RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 MEP1AQ16819 746 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 CNPY1Q3B7I2 92 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 GPAT3Q53EU6 434 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 PRAMEF8Q5VWM4 474 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 PRAMEF7Q5VXH5 474 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 AP1ARQ63HQ0 302 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 ANKRD34AQ69YU3 496 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 ZAR1Q86SH2 424 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 ALDH16A1Q8IZ83 802 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 SETD9Q8NE22 299 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 SLC22A8Q8TCC7 542 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 SNRNP27Q8WVK2 155 aaKnown RBP15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 APOBEC4Q8WW27 367 aaKnown RBP15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 DIO2Q92813 273 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 EFHD2Q96C19 240 aaPredicted RBP15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 OMA1Q96E52 524 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 ZNF607Q96SK3 696 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 TSC22D3Q99576 134 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 BARD1Q99728 777 aaKnown RBP15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 PSD2Q9BQI7 771 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 BCL2L10Q9HD36 194 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 TEKT2Q9UIF3 430 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 ENPP4Q9Y6X5 453 aa15.55■□□□□ 0.08
EXOSC3-203ENST00000465229 TNFRSF11BO00300 401 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 BCKDKO14874 412 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 TSPAN2O60636 221 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 REM1O75628 298 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 MFN2O95140 757 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ALPPP05187 535 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 RHCEP18577 417 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 CD247P20963 164 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ISL1P61371 349 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 CHRNEQ04844 493 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 PLCXD2Q0VAA5 305 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 DESI1Q6ICB0 168 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ZNF605Q86T29 641 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 FDCSPQ8NFU4 85 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 OR4C15Q8NGM1 316 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ADOQ96SZ5 270 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 PIP5K1AQ99755 562 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 TREX2Q9BQ50 279 aaPredicted RBP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ZNF350Q9GZX5 532 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 SAP130Q9H0E3 1048 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 SLC38A1Q9H2H9 487 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ZNF552Q9H707 407 aaPredicted RBP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ZBTB20Q9HC78 741 aaPredicted RBP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 GPR83Q9NYM4 423 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 BLOC1S6Q9UL45 172 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 PRAMEF25A6NGN4 478 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 STX11O75558 287 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 SERPINB7O75635 380 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 PPM1BO75688 479 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 CEACAM4O75871 244 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 OR6B1O95007 311 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 IFNW1P05000 195 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 FBXO45P0C2W1 286 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 NAGAP17050 411 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 TTKP33981 857 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 SOX3P41225 446 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 SSR4P51571 173 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 CRISP3P54108 245 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 CDH15P55291 814 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 TPD52P55327 224 aaPredicted RBP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 GABARAPL2P60520 117 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 RPS26P11Q5JNZ5 115 aaPredicted RBP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 C6orf141Q5SZD1 244 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ZNF468Q5VIY5 522 aaPredicted RBP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ABHD17BQ5VST6 288 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 AGAP7PQ5VUJ5 663 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 TYW3Q6IPR3 259 aaKnown RBP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 FRRS1Q6ZNA5 592 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ATG16L2Q8NAA4 619 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 GIPC3Q8TF64 312 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 ZG16BQ96DA0 208 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 AGAP4Q96P64 663 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 G6PC3Q9BUM1 346 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 KRT84Q9NSB2 600 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 KIF17Q9P2E2 1029 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 MRTO4Q9UKD2 239 aaKnown RBP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 MKLN1Q9UL63 735 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 FAM32AQ9Y421 112 aaKnown RBP15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 WDR45Q9Y484 360 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 COMMD3-BMI1R4GMX3 469 aa15.54■□□□□ 0.08
EXOSC3-203ENST00000465229 MAP1BP46821 2468 aaKnown RBP15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 A0A0G2JPF8 293 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 ARRDC5A6NEK1 342 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 HNRNPCL2B2RXH8 293 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 HNRNPCL3B7ZW38 293 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 GUSBP08236 651 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 HNRNPCL4P0DMR1 293 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 ANXA8P13928 327 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 KRT20P35900 424 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 LIMS1P48059 325 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 PNLIPRP2P54317 469 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 PSMD4P55036 377 aaKnown RBP15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 SH3BGRP55822 239 aaPredicted RBP15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 FBXW4P57775 412 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 ESRRGP62508 458 aa15.53■□□□□ 0.08
EXOSC3-203ENST00000465229 CXADRP78310 365 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms