RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MEDAGQ5VYS4 303 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 ACSM5Q6NUN0 579 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 NPSR1Q6W5P4 371 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 MEX3DQ86XN8 651 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 GRAMD2AQ8IUY3 354 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 NRMQ8IXM6 262 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 GPR135Q8IZ08 494 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 CCDC74AQ96AQ1 378 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 PTCHD1Q96NR3 888 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 PRSS27Q9BQR3 290 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 ZNF559Q9BR84 538 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 NDC1Q9BTX1 674 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 DUSP23Q9BVJ7 150 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 EGLN3Q9H6Z9 239 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 PRMT8Q9NR22 394 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 PRODH2Q9UF12 536 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 DTX4Q9Y2E6 619 aa20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 RPL36Q9Y3U8 105 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-216ENST00000464275 HYAL3O43820 417 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 NTN1O95631 604 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 IGKV1D-16P01601 117 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 ZSWIM7Q19AV6 140 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 PDZK1Q5T2W1 519 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 SLC27A4Q6P1M0 643 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 KANSL1Q7Z3B3 1105 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 MRGPREQ86SM8 312 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 ZNF615Q8N8J6 731 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 OR7G1Q8NGA0 311 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 OR4N2Q8NGD1 307 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 C16orf52Q8NHV5 167 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 G6PC3Q9BUM1 346 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 PLA2G12AQ9BZM1 189 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 DNAJC27Q9NZQ0 273 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 SERTAD3Q9UJW9 196 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 FER1L5A0AVI2 2057 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 PNMA8CA0A1B0GUJ8 204 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 A8MU76 341 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 KLF4O43474 513 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 TDGF1P13385 188 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 FOLR1P15328 257 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 PNLIPP16233 465 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 OR1D4P47884 311 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 PSMD4P55036 377 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 ZXDAP98168 799 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 YOD1Q5VVQ6 348 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 PLAG1Q6DJT9 500 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 RNF113BQ8IZP6 322 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 RCBTB1Q8NDN9 531 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 C7orf57Q8NEG2 295 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 OSTF1Q92882 214 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 PILRBQ9UKJ0 227 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 CFL2Q9Y281 166 aa20.1■□□□□ 0.81
PDLIM2-216ENST00000464275 A0A1B0GTQ1 180 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 PRKYO43930 277 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 PIP5K1CO60331 668 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 PTHP01270 115 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 SOX6P35712 828 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 EFNB1P98172 346 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 ZNF141Q15928 474 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 RNLSQ5VYX0 342 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 QSOX2Q6ZRP7 698 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 POGLUT1Q8NBL1 392 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 MAFAQ8NHW3 353 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 PRRG3Q9BZD7 231 aa20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 ZNF768Q9H5H4 540 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-216ENST00000464275 C17orf105B2RV13 164 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 DSCR3O14972 297 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 TLX2O43763 284 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 LYPD3O95274 346 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 PDGFBP01127 241 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 CT45A8P0DMV1 189 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 CT45A9P0DMV2 189 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 ETV6P41212 452 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 RNF144AP50876 292 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 RHAGQ02094 409 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 NCF4Q15080 339 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 SNAPC1Q16533 368 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 CT45A2Q5DJT8 189 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 ZNF613Q6PF04 617 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 CLDN22Q8N7P3 220 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 ZNF614Q8N883 585 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 OR8D4Q8NGM9 314 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 CNOT9Q92600 299 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 SLC35B4Q969S0 331 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 SIAEQ9HAT2 523 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 TMEM27Q9HBJ8 222 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 DHCR7Q9UBM7 475 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 ITGB1BP2Q9UKP3 347 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 CBLCQ9ULV8 474 aa20.08■□□□□ 0.81
PDLIM2-216ENST00000464275 TOX3O15405 576 aaPredicted RBP20.08■□□□□ 0.8
PDLIM2-216ENST00000464275 SNX4O95219 450 aa20.08■□□□□ 0.8
PDLIM2-216ENST00000464275 CLPSP04118 112 aa20.08■□□□□ 0.8
PDLIM2-216ENST00000464275 FBLP22087 321 aaKnown RBP20.08■□□□□ 0.8
PDLIM2-216ENST00000464275 GPR4P46093 362 aa20.08■□□□□ 0.8
PDLIM2-216ENST00000464275 PLAURQ03405 335 aa20.08■□□□□ 0.8
PDLIM2-216ENST00000464275 DSG2Q14126 1118 aa20.08■□□□□ 0.8
PDLIM2-216ENST00000464275 GDPGP1Q6ZNW5 385 aa20.08■□□□□ 0.8
PDLIM2-216ENST00000464275 GATAD2AQ86YP4 633 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms