RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CDC20Q12834 499 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 TSPAN31Q12999 210 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 ATP1A4Q13733 1029 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 TRAM2Q15035 370 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 TGIF1Q15583 401 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF181Q2M3W8 571 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 TMEM44Q2T9K0 475 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 GPAT3Q53EU6 434 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 EXOSC6Q5RKV6 272 aaKnown RBP9.19□□□□□ -0.94
PTPRD-207ENST00000463477 MANEAQ5SRI9 462 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 TMEM107Q6UX40 140 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 SZRD1Q7Z422 152 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 FAM20CQ8IXL6 584 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 LRRC25Q8N386 305 aaPredicted RBP9.19□□□□□ -0.94
PTPRD-207ENST00000463477 NANOGP1Q8N7R0 232 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 SNRNP27Q8WVK2 155 aaKnown RBP9.19□□□□□ -0.94
PTPRD-207ENST00000463477 DIO2Q92813 273 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 PMM1Q92871 262 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 NKD1Q969G9 470 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 OPALINQ96PE5 141 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 MS4A4EQ96PG1 132 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 CCNL2Q96S94 520 aaPredicted RBP9.19□□□□□ -0.94
PTPRD-207ENST00000463477 PRRG3Q9BZD7 231 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 OR51E2Q9H255 320 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 SP140LQ9H930 580 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 SYNPO2LQ9H987 977 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 ISYNA1Q9NPH2 558 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 KLHL28Q9NXS3 571 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 KCMF1Q9P0J7 381 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 PTGFRNQ9P2B2 879 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 DAPK2Q9UIK4 370 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 RARRES3Q9UL19 164 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 DIMT1Q9UNQ2 313 aaKnown RBP9.19□□□□□ -0.94
PTPRD-207ENST00000463477 PNMA8CA0A1B0GUJ8 204 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 GLOD5A6NK44 160 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 SNTNA6NMZ2 147 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 M0R129 80 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 EFSO43281 561 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 CYP7B1O75881 506 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 STK17BO94768 372 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 SNX4O95219 450 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 ADRA2AP08913 450 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 ST6GAL1P15907 406 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 PORP16435 677 aaPredicted RBP9.18□□□□□ -0.94
PTPRD-207ENST00000463477 UGT2B7P16662 529 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 SOX6P35712 828 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 FEN1P39748 380 aaKnown RBP9.18□□□□□ -0.94
PTPRD-207ENST00000463477 MC3RP41968 323 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 PRKAG1P54619 331 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 RAB8AP61006 207 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 IFITM3Q01628 133 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 ST3GAL3Q11203 375 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 MLLT11Q13015 90 aaPredicted RBP9.18□□□□□ -0.94
PTPRD-207ENST00000463477 KCNAB1Q14722 419 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 SPHARQ15513 63 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 MED22Q15528 200 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 SSX1Q16384 188 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 COL28A1Q2UY09 1125 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 FAM214AQ32MH5 1076 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 KLHL22Q53GT1 634 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF311Q5JNZ3 666 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 MFSD12Q6NUT3 480 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 FBXO42Q6P3S6 717 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 PLEKHG7Q6ZR37 379 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 RASSF6Q6ZTQ3 369 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 OR2L13Q8N349 312 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 TCEANCQ8N8B7 351 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 CAMKVQ8NCB2 501 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF501Q96CX3 271 aaPredicted RBP9.18□□□□□ -0.94
PTPRD-207ENST00000463477 C16orf58Q96GQ5 468 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 TCTN2Q96GX1 697 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 OR2A5Q96R48 311 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 OR5M11Q96RB7 305 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 IL4I1Q96RQ9 567 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 TSSK6Q9BXA6 273 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 PRORYQ9H606 182 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 EVA1AQ9H8M9 152 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 HHATLQ9HCP6 504 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 LYRM4Q9HD34 91 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 FGF20Q9NP95 211 aaPredicted RBP9.18□□□□□ -0.94
PTPRD-207ENST00000463477 SEC14L4Q9UDX3 406 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 TESQ9UGI8 421 aaKnown RBP9.18□□□□□ -0.94
PTPRD-207ENST00000463477 SLC13A4Q9UKG4 626 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 KLHL20Q9Y2M5 609 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 ZFYVE26Q68DK2 2539 aa9.18□□□□□ -0.94
PTPRD-207ENST00000463477 SDK2Q58EX2 2172 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 A0A087WUU8 490 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 A0A087WV62 115 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 A0A0J9YY10 115 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 WASHC1A8K0Z3 465 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 K7ENP7 123 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 UPK1BO75841 260 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 OR5F1O95221 314 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 SOX14O95416 240 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 RAB36O95755 333 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 DLGAP3O95886 979 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 THBS1P07996 1170 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF888P0CJ79 500 aaPredicted RBP9.17□□□□□ -0.94
PTPRD-207ENST00000463477 TLX1P31314 330 aaPredicted RBP9.17□□□□□ -0.94
PTPRD-207ENST00000463477 S100A5P33763 92 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms