RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZNF117Q03924 483 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 LRIF1Q5T3J3 769 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 TYW3Q6IPR3 259 aaKnown RBP11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 ACBD4Q8NC06 268 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 TUBA1CQ9BQE3 449 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 PAIP1Q9H074 479 aaKnown RBP11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 ZNF385DQ9H6B1 395 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 TPT1P8Q9HAU6 139 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 KCNJ16Q9NPI9 418 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 PAQR5Q9NXK6 330 aaPredicted RBP11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 CLCF1Q9UBD9 225 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 P2RX2Q9UBL9 471 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 ZNF629Q9UEG4 869 aaPredicted RBP11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 Q9UFV3 132 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 ICAM5Q9UMF0 924 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 RPH3AQ9Y2J0 694 aaPredicted RBP11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 ZNF175Q9Y473 711 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 RELNP78509 3460 aa11.81□□□□□ -0.52
R3HDM1-213ENST00000463230 CACNA1CQ13936 2221 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 ETV2O00321 342 aaPredicted RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 HNRNPRO43390 633 aaKnown RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 TNFRSF21O75509 655 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 UGT2B17O75795 530 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 RPS3AP61247 264 aaKnown RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 FUT5Q11128 374 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 FADDQ13158 208 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 FGFBP1Q14512 234 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 GPR68Q15743 365 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 ZSWIM7Q19AV6 140 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 C6orf10Q5SRN2 563 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 PDZK1Q5T2W1 519 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 PRAMEF8Q5VWM4 474 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 PRAMEF7Q5VXH5 474 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 SP5Q6BEB4 398 aaPredicted RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 FRRS1Q6ZNA5 592 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 SEM1Q6ZVN7 128 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 EIF3MQ7L2H7 374 aaKnown RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 CHMP1BQ7LBR1 199 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 FUNDC1Q8IVP5 155 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 GATSQ8NAP1 163 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 FAM71CQ8NEG0 241 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 OR5W2Q8NH69 310 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 RAB8BQ92930 207 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 VPS33AQ96AX1 596 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 TRIB1Q96RU8 372 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 SPOCK3Q9BQ16 436 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 EXOSC3Q9NQT5 275 aaKnown RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 CORO2BQ9UQ03 480 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 GPC6Q9Y625 555 aaPredicted RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 C17orf51A8MQB3 221 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 DYNC1I1O14576 645 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 GSNP06396 782 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 CRHP06850 196 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 LINGO3P0C6S8 592 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 BMP2P12643 396 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 HOXB9P17482 250 aaPredicted RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 PEX19P40855 299 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 MVDP53602 400 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 CBFBQ13951 182 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 GPAT3Q53EU6 434 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 AGKQ53H12 422 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 ARSKQ6UWY0 536 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 METTL25Q8N6Q8 603 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 RFWD2Q8NHY2 731 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 LRRC46Q96FV0 321 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 MRGPRX4Q96LA9 322 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 TREX2Q9BQ50 279 aaPredicted RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 MTHFD2LQ9H903 347 aaPredicted RBP11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 SLC52A3Q9NQ40 469 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 CCDC167Q9P0B6 97 aa11.8□□□□□ -0.52
R3HDM1-213ENST00000463230 NPIPA5A0A0B4J1W7 369 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 A0A1W2PP18 115 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 TMEM247A6NEH6 219 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 CLCA1A8K7I4 914 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 NPIPA7E9PJI5 369 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 NR5A2O00482 541 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 DVL2O14641 736 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 FCMRO60667 390 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 RCBTB2O95199 551 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 NPIPA8P0DM63 369 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 PSMA4P25789 261 aaKnown RBP11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 DLX5P56178 289 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 DSTNP60981 165 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 RAC1P63000 192 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 OR2A2Q6IF42 318 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 DNAJC14Q6Y2X3 702 aaPredicted RBP11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 CCDC71Q8IV32 467 aaPredicted RBP11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 GPR119Q8TDV5 335 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 ST8SIA1Q92185 356 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 SH3YL1Q96HL8 342 aaPredicted RBP11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 DCTN4Q9UJW0 460 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 MKLN1Q9UL63 735 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 ZNF337Q9Y3M9 751 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 L3MBTL1Q9Y468 752 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 PCNX3Q9H6A9 2034 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 A0A0G2JND7 137 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 GJE1A6NN92 205 aa11.79□□□□□ -0.52
R3HDM1-213ENST00000463230 TOXO94900 526 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms