RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 EIF1AYO14602 144 aaKnown RBP8.21□□□□□ -1.1
BRCA1-207ENST00000461798 ITM2AO43736 263 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 SS18L1O75177 396 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-207ENST00000461798 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.1
BRCA1-207ENST00000461798 C6orf47O95873 294 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 SERPINE1P05121 402 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 GUSBP08236 651 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 G6PDP11413 515 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 NID1P14543 1247 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 FOSL1P15407 271 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 HPGDP15428 266 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 CRYGSP22914 178 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 UGT2B10P36537 528 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 SLC6A8P48029 635 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 ATP12AP54707 1039 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 HBA1P69905 142 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF844Q08AG5 666 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 CD226Q15762 336 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 DEFB113Q30KQ7 82 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 KRT71Q3SY84 523 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 CCNJQ5T5M9 372 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 BHLHB9Q6PI77 547 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 SZRD1Q7Z422 152 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 GALNT10Q86SR1 603 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 LRRC34Q8IZ02 419 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 KIRREL3Q8IZU9 778 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 OR8J2Q8NGG1 315 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 OR6K3Q8NGY3 331 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 OR10D3Q8NH80 312 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 OR2V1Q8NHB1 315 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 B4GALNT2Q8NHY0 566 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 FBXO30Q8TB52 745 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 CDS1Q92903 461 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 GMPPAQ96IJ6 420 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-207ENST00000461798 MARK4Q96L34 752 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 NPAS1Q99742 590 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 C1orf50Q9BV19 199 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 DUSP26Q9BV47 211 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 PARD6BQ9BYG5 372 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 OPN3Q9H1Y3 402 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF226Q9NYT6 803 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 RAB21Q9UL25 225 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 ICAM5Q9UMF0 924 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 FAF1Q9UNN5 650 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-207ENST00000461798 PROCRQ9UNN8 238 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 RAP2CQ9Y3L5 183 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 SNX8Q9Y5X2 465 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 KCNE3Q9Y6H6 103 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 PCNX3Q9H6A9 2034 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 A0A0J9YW62 118 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 DUXAA6NLW8 204 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 DEFB108AA8MXU0 73 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 H3BNH8 94 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ETV2O00321 342 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 RNASET2O00584 256 aaKnown RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 TM9SF1O15321 606 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 RGS16O15492 202 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 EFNA2O43921 213 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 CXCL13O43927 109 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF500O60304 480 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 EIF4E2O60573 245 aaKnown RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 DNAJA2O60884 412 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 SCN2BO60939 215 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 SKAP2O75563 359 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 NTN1O95631 604 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 MYZAPP0CAP1 466 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 PABPC4LP0CB38 370 aaKnown RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 POU2F1P14859 743 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 CD53P19397 219 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 KLK2P20151 261 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ATP6V1C1P21283 382 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ELK4P28324 431 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 CPOXP36551 454 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 EIF1AXP47813 144 aaKnown RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 RPL14P50914 215 aaKnown RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 P2RX1P51575 399 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF41P51814 821 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 SUMO3P55854 103 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ABCE1P61221 599 aaKnown RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 SIRPAP78324 504 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ADAM8P78325 824 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF117Q03924 483 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 TP53BP2Q13625 1128 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 KEAP1Q14145 624 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 MPP2Q14168 576 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 CHI3L2Q15782 390 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 SPDYE7PQ495Y7 208 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 SLC25A53Q5H9E4 307 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 DCST2Q5T1A1 773 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 PDSS1Q5T2R2 415 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 FBXW10Q5XX13 1052 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 GTF2IRD2BQ6EKJ0 949 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 CBLN3Q6UW01 205 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 C6orf120Q7Z4R8 191 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 GTF2IRD2Q86UP8 949 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF781Q8N8C0 355 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 GATSQ8NAP1 163 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF527Q8NB42 609 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 PPP1R14CQ8TAE6 165 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms