RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 NF2P35240 595 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 MAGEA5P43359 124 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 EFNA3P52797 238 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 AP3M2P53677 418 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 PLA2G16P53816 162 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 RPL8P62917 257 aaKnown RBP2.93□□□□□ -1.94
CLK1-206ENST00000461326 GPM6BQ13491 265 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 RUNX3Q13761 415 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 CHI3L2Q15782 390 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 Q1RN00 199 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 FAM74A3Q4VXF1 159 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 TTC23Q5W5X9 447 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 PRSS48Q7RTY5 328 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 TMEM110Q86TL2 294 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 SERPINA9Q86WD7 417 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 UNC5CLQ8IV45 518 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 ZNF683Q8IZ20 524 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 DHRSXQ8N5I4 330 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 OR52M1Q8NGK5 317 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 FOXN4Q96NZ1 517 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 RIT2Q99578 217 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 DPH7Q9BTV6 452 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 CRNKL1Q9BZJ0 848 aaKnown RBP2.93□□□□□ -1.94
CLK1-206ENST00000461326 PPDPFQ9H3Y8 114 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 PALMDQ9NP74 551 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 PNO1Q9NRX1 252 aaKnown RBP2.93□□□□□ -1.94
CLK1-206ENST00000461326 UTP6Q9NYH9 597 aaKnown RBP2.93□□□□□ -1.94
CLK1-206ENST00000461326 DHRS4-AS1Q9P1J3 65 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 GNG12Q9UBI6 72 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 RPH3ALQ9UNE2 315 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 MRPS33Q9Y291 106 aaKnown RBP2.93□□□□□ -1.94
CLK1-206ENST00000461326 LRRIQ1Q96JM4 1722 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 HECW1Q76N89 1606 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 KDM5BQ9UGL1 1544 aa2.93□□□□□ -1.94
CLK1-206ENST00000461326 PCF11O94913 1555 aaKnown RBP2.92□□□□□ -1.94
CLK1-206ENST00000461326 ABCC10Q5T3U5 1492 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 RALGAPA1Q6GYQ0 2036 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 METP08581 1390 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 SYNJ2BP-COX16A0A087WUM0 186 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 A0A087WWV3 80 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 CLRN2A0PK11 232 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 A8MX80 341 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 MSH4O15457 936 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 PHF1O43189 567 aaPredicted RBP2.92□□□□□ -1.94
CLK1-206ENST00000461326 GPAA1O43292 621 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 BCL2L11O43521 198 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 OR1F1O43749 312 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 ZNF354AO60765 605 aaPredicted RBP2.92□□□□□ -1.94
CLK1-206ENST00000461326 SCGNO76038 276 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 SLC2A10O95528 541 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 IGHG3P01860 377 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 IGF1P05019 195 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 CPN1P15169 458 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 PGAM2P15259 253 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 RGS4P49798 205 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 NOVA1P51513 510 aaKnown RBP2.92□□□□□ -1.94
CLK1-206ENST00000461326 SLC25A1P53007 311 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 CD47Q08722 323 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 PJVKQ0ZLH3 352 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 RAB40BQ12829 278 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 COX10Q12887 443 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 GANABQ14697 944 aaKnown RBP2.92□□□□□ -1.94
CLK1-206ENST00000461326 QRICH1Q2TAL8 776 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 TMEM225Q6GV28 225 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 ACSM5Q6NUN0 579 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 FAM71F2Q6NXP2 309 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 CASC1Q6TDU7 716 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 C9orf40Q8IXQ3 194 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 MCOLN2Q8IZK6 566 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 LYG1Q8N1E2 194 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 CADM2Q8N3J6 435 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 CSNK1A1LQ8N752 337 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 Q8N9G6 341 aaPredicted RBP2.92□□□□□ -1.94
CLK1-206ENST00000461326 OR9A4Q8NGU2 314 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 CTNNBL1Q8WYA6 563 aaPredicted RBP2.92□□□□□ -1.94
CLK1-206ENST00000461326 C18orf25Q96B23 403 aaPredicted RBP2.92□□□□□ -1.94
CLK1-206ENST00000461326 TUBGCP2Q9BSJ2 902 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 TM2D1Q9BX74 207 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 TEX13BQ9BXU2 312 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 NUDT15Q9NV35 164 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 SLC2A6Q9UGQ3 507 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 OARD1Q9Y530 152 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 CLIP1P30622 1438 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 FMN1Q68DA7 1419 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 ATP10DQ9P241 1426 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 NOTCH2Q04721 2471 aa2.92□□□□□ -1.94
CLK1-206ENST00000461326 PPRC1Q5VV67 1664 aaKnown RBP2.92□□□□□ -1.94
CLK1-206ENST00000461326 ATP10BO94823 1461 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 NUP153P49790 1475 aaKnown RBP2.91□□□□□ -1.94
CLK1-206ENST00000461326 WDR7Q9Y4E6 1490 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 MAP3K4Q9Y6R4 1608 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 IGKV6D-41A0A0C4DH26 115 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 BTN3A3O00478 584 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 OR7A17O14581 309 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 N4BP1O75113 896 aaKnown RBP2.91□□□□□ -1.94
CLK1-206ENST00000461326 UGT2B17O75795 530 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 CABYRO75952 493 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 B3GAT3O94766 335 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 UMPSP11172 480 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 DBTP11182 482 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms