RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 METTL25Q8N6Q8 603 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 SMPDL3BQ92485 455 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 NEURL3Q96EH8 262 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 PANX1Q96RD7 426 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 SLC35A5Q9BS91 424 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 PINK1Q9BXM7 581 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 PIGMQ9H3S5 423 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 ZNF175Q9Y473 711 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 DOCK7Q96N67 2140 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 KIAA1549Q9HCM3 1950 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 H0YC42 278 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 SLC22A3O75751 556 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 IL6P05231 212 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 GUSBP08236 651 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 IL12AP29459 219 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 TPD52P55327 224 aaPredicted RBP20.71■□□□□ 0.91
PTPN4-208ENST00000460289 SUMO3P55854 103 aaPredicted RBP20.71■□□□□ 0.91
PTPN4-208ENST00000460289 RAC1P63000 192 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 SGCBQ16585 318 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 PDCD4Q53EL6 469 aaKnown RBP20.71■□□□□ 0.91
PTPN4-208ENST00000460289 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.71■□□□□ 0.91
PTPN4-208ENST00000460289 HEPHL1Q6MZM0 1159 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 GCNT2Q8N0V5 402 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 ZNF614Q8N883 585 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 LRRC8CQ8TDW0 803 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 XAGE5Q8WWM1 108 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 C7orf26Q96N11 449 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 VIPAS39Q9H9C1 493 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 PAQR5Q9NXK6 330 aaPredicted RBP20.71■□□□□ 0.91
PTPN4-208ENST00000460289 CARD8Q9Y2G2 431 aa20.71■□□□□ 0.91
PTPN4-208ENST00000460289 CCDC154A6NI56 674 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 ENO4A6NNW6 628 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 ZNF195O14628 629 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 UBDO15205 165 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 EIF4E2O60573 245 aaKnown RBP20.7■□□□□ 0.9
PTPN4-208ENST00000460289 FCMRO60667 390 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 NUDT14O95848 222 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 OR12D1P0DN82 309 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 ME2P23368 584 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 KHKP50053 298 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 CASP9P55211 416 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 TXNL4AP83876 142 aaKnown RBP20.7■□□□□ 0.9
PTPN4-208ENST00000460289 GPR68Q15743 365 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 TTMPQ5BVD1 217 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 FIG4Q92562 907 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 ICAM5Q9UMF0 924 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 USH1CQ9Y6N9 552 aa20.7■□□□□ 0.9
PTPN4-208ENST00000460289 A0A1W2PNV4 684 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 HMGB1P1B2RPK0 211 aaPredicted RBP20.69■□□□□ 0.9
PTPN4-208ENST00000460289 EIF1AYO14602 144 aaKnown RBP20.69■□□□□ 0.9
PTPN4-208ENST00000460289 ZNF264O43296 627 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 DIAPH2O60879 1101 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 LINGO3P0C6S8 592 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 PSMA4P25789 261 aaKnown RBP20.69■□□□□ 0.9
PTPN4-208ENST00000460289 ADH6P28332 368 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 ANXA11P50995 505 aaKnown RBP20.69■□□□□ 0.9
PTPN4-208ENST00000460289 PON3Q15166 354 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 ZNF141Q15928 474 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 PDSS1Q5T2R2 415 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 PDZK1Q5T2W1 519 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 TNFAIP8L2Q6P589 184 aaPredicted RBP20.69■□□□□ 0.9
PTPN4-208ENST00000460289 CBLN3Q6UW01 205 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 ZNF621Q6ZSS3 439 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 MAVSQ7Z434 540 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 GGNQ86UU5 652 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 DYDC1Q8WWB3 177 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 OIT3Q8WWZ8 545 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 RNF145Q96MT1 663 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 ZNF350Q9GZX5 532 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 POLE3Q9NRF9 147 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 SDR39U1Q9NRG7 319 aaPredicted RBP20.69■□□□□ 0.9
PTPN4-208ENST00000460289 ZIM2Q9NZV7 527 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 PACSIN3Q9UKS6 424 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 MKLN1Q9UL63 735 aa20.69■□□□□ 0.9
PTPN4-208ENST00000460289 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 SERINC4A6NH21 518 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 C9JVG2 144 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 TNFSF13O75888 250 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 TGDSO95455 350 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 FCGR2AP12318 317 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 EIF1AXP47813 144 aaKnown RBP20.68■□□□□ 0.9
PTPN4-208ENST00000460289 CPA2P48052 419 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 KRTAP10-9P60411 292 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 SORDQ00796 357 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 SNTB1Q13884 538 aaKnown RBP20.68■□□□□ 0.9
PTPN4-208ENST00000460289 FGFBP1Q14512 234 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 AP1ARQ63HQ0 302 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 EPGNQ6UW88 154 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 ESPNLQ6ZVH7 1005 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 ZZZ3Q8IYH5 903 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 TOR1AIP2Q8NFQ8 470 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 FNDC9Q8TBE3 224 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 POC1BQ8TC44 478 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 RAB8BQ92930 207 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 ZNF845Q96IR2 970 aaPredicted RBP20.68■□□□□ 0.9
PTPN4-208ENST00000460289 OR52B2Q96RD2 323 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 RBM24Q9BX46 236 aaKnown RBP20.68■□□□□ 0.9
PTPN4-208ENST00000460289 RNF122Q9H9V4 155 aa20.68■□□□□ 0.9
PTPN4-208ENST00000460289 GPC6Q9Y625 555 aaPredicted RBP20.68■□□□□ 0.9
PTPN4-208ENST00000460289 TACC2O95359 2948 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms