RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TNFAIP8L2Q6P589 184 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 WDR74Q6RFH5 385 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 TMEM107Q6UX40 140 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 TFAP2EQ6VUC0 442 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 GALNT10Q86SR1 603 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 EID2Q8N6I1 236 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 C10orf53Q8N6V4 93 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 ATG16L2Q8NAA4 619 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 PAPD5Q8NDF8 572 aaKnown RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 OR4K14Q8NGD5 310 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 OR5T2Q8NGG2 359 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 METTL21AQ8WXB1 218 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 POP5Q969H6 163 aaKnown RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 RNF170Q96K19 258 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 C10orf90Q96M02 699 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 VRK1Q99986 396 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 GTPBP2Q9BX10 602 aaKnown RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 AKIP1Q9NQ31 210 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 AGPAT4Q9NRZ5 378 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 GPN3Q9UHW5 284 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 AP4B1Q9Y6B7 739 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 SPTBP11277 2137 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 SCN2AQ99250 2005 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 A0A0A6YYC8 382 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 HYKKA2RU49 373 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 I3L1I5 382 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 TXNL1O43396 289 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 SGCEO43556 437 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 AKAP8O43823 692 aaKnown RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 H6PDO95479 791 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 SYPP08247 313 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 PCGF2P35227 344 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 XKP51811 444 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 PRKAG1P54619 331 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 CFHR1Q03591 330 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 DUSP2Q05923 314 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 RBBP4Q09028 425 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 NFATC3Q12968 1075 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ZNF169Q14929 603 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 FGD3Q5JSP0 725 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 AGAP6Q5VW22 663 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ZNF544Q6NX49 715 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 SLC23A3Q6PIS1 610 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 LHFPL3Q86UP9 236 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 SLC22A16Q86VW1 577 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ZDHHC13Q8IUH4 622 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ZC3H7AQ8IWR0 971 aaKnown RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 OR4N5Q8IXE1 308 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 LRRC25Q8N386 305 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 OR4M2Q8NGB6 313 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 OR10Q1Q8NGQ4 319 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 OR9A2Q8NGT5 310 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 CPNE4Q96A23 557 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 FAM122AQ96E09 287 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ZHX1-C8orf76Q96EF9 292 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 SGTBQ96EQ0 304 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ZNF681Q96N22 645 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 AGAP4Q96P64 663 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 NUDT22Q9BRQ3 303 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 NPLQ9BXD5 320 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 CHRNA10Q9GZZ6 450 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 TMEM38AQ9H6F2 299 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 CTSFQ9UBX1 484 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 A0A1B0GV90 55 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 MFSD2BA6NFX1 497 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 VSTM5A8MXK1 200 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 TFECO14948 347 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 CASC3O15234 703 aaKnown RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 LDB3O75112 727 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 DEAF1O75398 565 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 PTBP3O95758 552 aaKnown RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 LDLRP01130 860 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 IFNA4P05014 189 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 PNLIPP16233 465 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 CKMT2P17540 419 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 GABRA4P48169 554 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 GBX2P52951 348 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 PRR5P85299 388 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 CDK6Q00534 326 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 IFITM3Q01628 133 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 FAM53BQ14153 422 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 CEBPEQ15744 281 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ZNF630Q2M218 657 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 Q5BKY6 102 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 CA13Q8N1Q1 262 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ARHGEF39Q8N4T4 335 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 HORMAD2Q8N7B1 307 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 NFKBIDQ8NI38 313 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 CENPNQ96H22 339 aaPredicted RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 PYURFQ96I23 114 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 SLC35G5Q96KT7 338 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ESRP2Q9H6T0 727 aaKnown RBP9.66□□□□□ -0.86
HERC4-207ENST00000460168 C19orf12Q9NSK7 152 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 OLAHQ9NV23 265 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 ZNF229Q9UJW7 825 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 PCDHGB1Q9Y5G3 927 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 HSPE1-MOB4S4R3N1 261 aa9.66□□□□□ -0.86
HERC4-207ENST00000460168 TMEM150CB9EJG8 249 aa9.65□□□□□ -0.86
HERC4-207ENST00000460168 FAM227AF5H4B4 570 aa9.65□□□□□ -0.86
HERC4-207ENST00000460168 I3L521 148 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms