RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 IL33O95760 270 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 CT45A8P0DMV1 189 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 CT45A9P0DMV2 189 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 CCL4P13236 92 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 FOLR3P41439 243 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 YAP1P46937 504 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 RFX3P48380 749 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 UGT2B15P54855 530 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 EEF1A1P68104 462 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 GANABQ14697 944 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 TRAM2Q15035 370 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 NCF4Q15080 339 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 EBPQ15125 230 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 ZNF141Q15928 474 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 CT45A2Q5DJT8 189 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 MRPL2Q5T653 305 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 TCTN3Q6NUS6 607 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 PAPD4Q6PIY7 484 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 TBPL2Q6SJ96 375 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 NPSR1Q6W5P4 371 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 HSDL2Q6YN16 418 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 ZNF836Q6ZNA1 936 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 RRM2BQ7LG56 351 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 ZNF550Q7Z398 422 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 CPEB2Q7Z5Q1 589 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 TMEM179BQ7Z7N9 219 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 GRAMD2AQ8IUY3 354 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 SLC34A3Q8N130 599 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 ZNF614Q8N883 585 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 BCORP1Q8N888 145 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 EXD3Q8N9H8 876 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 SLC38A9Q8NBW4 561 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 SIMC1Q8NDZ2 872 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 B3GNT7Q8NFL0 401 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 OR5L2Q8NGL0 311 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 OR6T1Q8NGN1 323 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 OR8K3Q8NH51 312 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 WDR36Q8NI36 951 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 NUBPLQ8TB37 319 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 DOK4Q8TEW6 326 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 TP53INP1Q96A56 240 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 GAL3ST4Q96RP7 486 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 MCHR1Q99705 422 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 APOL4Q9BPW4 351 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 ZNF559Q9BR84 538 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 YTHDF1Q9BYJ9 559 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 B3GNT4Q9C0J1 378 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 WWTR1Q9GZV5 400 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 ING2Q9H160 280 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 TOR3AQ9H497 397 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 SOX17Q9H6I2 414 aaPredicted RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 POLR1BQ9H9Y6 1135 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 NMNAT1Q9HAN9 279 aaPredicted RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 SMURF2Q9HAU4 748 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 BATF3Q9NR55 127 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 PAPOLBQ9NRJ5 636 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 UBQLN4Q9NRR5 601 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 ACER3Q9NUN7 267 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 SELENONQ9NZV5 590 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 PPIEQ9UNP9 301 aaKnown RBP8.25□□□□□ -1.09
VPS50-207ENST00000458530 HSPE1-MOB4S4R3N1 261 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
VPS50-207ENST00000458530 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
VPS50-207ENST00000458530 CLEC18AA5D8T8 446 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 CDHR4A6H8M9 788 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 OR2W5A6NFC9 320 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 J3KTA2 159 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 HRKO00198 91 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 AGRPO00253 132 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 BCKDKO14874 412 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 PLD2O14939 933 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 TO15178 435 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 NME6O75414 186 aaPredicted RBP8.24□□□□□ -1.09
VPS50-207ENST00000458530 STK17BO94768 372 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 CLPSP04118 112 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 RAB40ALP0C0E4 278 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 GSTM3P21266 225 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 ELAVL4P26378 380 aaKnown RBP8.24□□□□□ -1.09
VPS50-207ENST00000458530 LIMS1P48059 325 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 TMED10P49755 219 aaKnown RBP8.24□□□□□ -1.09
VPS50-207ENST00000458530 NUP107P57740 925 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 ESRRGP62508 458 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 ADARB1P78563 741 aaKnown RBP8.24□□□□□ -1.09
VPS50-207ENST00000458530 IL1RL1Q01638 556 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 PLCXD2Q0VAA5 305 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 KCNAB2Q13303 367 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 KEAP1Q14145 624 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 EFR3AQ14156 821 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 FGFBP1Q14512 234 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 EXT1Q16394 746 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 PDZK1Q5T2W1 519 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 FAAH2Q6GMR7 532 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 TTC33Q6PID6 262 aaPredicted RBP8.24□□□□□ -1.09
VPS50-207ENST00000458530 TMEM205Q6UW68 189 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 FAM198BQ6UWH4 519 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 C6orf15Q6UXA7 325 aaPredicted RBP8.24□□□□□ -1.09
VPS50-207ENST00000458530 CLEC18BQ6UXF7 455 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 LANCL3Q6ZV70 420 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 TSEN54Q7Z6J9 526 aaKnown RBP8.24□□□□□ -1.09
VPS50-207ENST00000458530 HS3ST5Q8IZT8 346 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms