RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ALG5Q9Y673 324 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 MRPS18BQ9Y676 258 aaKnown RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 AUP1Q9Y679 476 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CDY2AQ9Y6F7 541 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CENPFP49454 3210 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CARMIL3Q8ND23 1372 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 NRXN2Q9P2S2 1712 aa5□□□□□ -1.61
VPS41-209ENST00000457055 TBC1D3KA0A087X1G2 549 aa5□□□□□ -1.61
VPS41-209ENST00000457055 GAGE12BA1L429 117 aa5□□□□□ -1.61
VPS41-209ENST00000457055 MAGEA13PA6NCF6 341 aa5□□□□□ -1.61
VPS41-209ENST00000457055 GAGE12HA6NDE8 117 aa5□□□□□ -1.61
VPS41-209ENST00000457055 ANKRD65E5RJM6 399 aa5□□□□□ -1.61
VPS41-209ENST00000457055 NEDD8-MDP1E9PL57 170 aa5□□□□□ -1.61
VPS41-209ENST00000457055 M0R296 226 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PDHXO00330 501 aa5□□□□□ -1.61
VPS41-209ENST00000457055 ARPC5O15511 151 aa5□□□□□ -1.61
VPS41-209ENST00000457055 SGCEO43556 437 aa5□□□□□ -1.61
VPS41-209ENST00000457055 SNAI2O43623 268 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PLRG1O43660 514 aaKnown RBP5□□□□□ -1.61
VPS41-209ENST00000457055 OR10H2O60403 315 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CCDC22O60826 627 aa5□□□□□ -1.61
VPS41-209ENST00000457055 HUS1O60921 280 aa5□□□□□ -1.61
VPS41-209ENST00000457055 SDC3O75056 442 aa5□□□□□ -1.61
VPS41-209ENST00000457055 B3GAT3O94766 335 aa5□□□□□ -1.61
VPS41-209ENST00000457055 OR4F21O95013 312 aa5□□□□□ -1.61
VPS41-209ENST00000457055 NDUFA10O95299 355 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PSMG1O95456 288 aa5□□□□□ -1.61
VPS41-209ENST00000457055 GSRP00390 522 aa5□□□□□ -1.61
VPS41-209ENST00000457055 SERPINA1P01009 418 aa5□□□□□ -1.61
VPS41-209ENST00000457055 IFNA21P01568 189 aa5□□□□□ -1.61
VPS41-209ENST00000457055 IFNA5P01569 189 aa5□□□□□ -1.61
VPS41-209ENST00000457055 FGGP02679 453 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CDK1P06493 297 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CRYGBP07316 175 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PET100P0DJ07 73 aa5□□□□□ -1.61
VPS41-209ENST00000457055 RNH1P13489 461 aaKnown RBP5□□□□□ -1.61
VPS41-209ENST00000457055 MMP9P14780 707 aa5□□□□□ -1.61
VPS41-209ENST00000457055 TPSB2P20231 275 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CD22P20273 847 aa5□□□□□ -1.61
VPS41-209ENST00000457055 FPR1P21462 350 aa5□□□□□ -1.61
VPS41-209ENST00000457055 ZP3P21754 424 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PCMT1P22061 227 aa5□□□□□ -1.61
VPS41-209ENST00000457055 FDXRP22570 491 aa5□□□□□ -1.61
VPS41-209ENST00000457055 DCKP27707 260 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CD6P30203 668 aa5□□□□□ -1.61
VPS41-209ENST00000457055 SLC6A6P31641 620 aa5□□□□□ -1.61
VPS41-209ENST00000457055 SHMT2P34897 504 aa5□□□□□ -1.61
VPS41-209ENST00000457055 MAGEA12P43365 314 aa5□□□□□ -1.61
VPS41-209ENST00000457055 AVPR1BP47901 424 aa5□□□□□ -1.61
VPS41-209ENST00000457055 TPMTP51580 245 aa5□□□□□ -1.61
VPS41-209ENST00000457055 KPNA2P52292 529 aaKnown RBP5□□□□□ -1.61
VPS41-209ENST00000457055 HERV-K104P63124 156 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CCL7P80098 99 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CDR2Q01850 454 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PAX5Q02548 391 aa5□□□□□ -1.61
VPS41-209ENST00000457055 RAB39AQ14964 217 aa5□□□□□ -1.61
VPS41-209ENST00000457055 TAF13Q15543 124 aa5□□□□□ -1.61
VPS41-209ENST00000457055 TPSAB1Q15661 275 aa5□□□□□ -1.61
VPS41-209ENST00000457055 DUSP7Q16829 419 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CNPY1Q3B7I2 92 aa5□□□□□ -1.61
VPS41-209ENST00000457055 ADPRMQ3LIE5 342 aa5□□□□□ -1.61
VPS41-209ENST00000457055 ITPRIPL2Q3MIP1 535 aa5□□□□□ -1.61
VPS41-209ENST00000457055 POM121L1PQ3SYA9 428 aa5□□□□□ -1.61
VPS41-209ENST00000457055 SBK1Q52WX2 424 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PIGGQ5H8A4 983 aa5□□□□□ -1.61
VPS41-209ENST00000457055 ZNF569Q5MCW4 686 aa5□□□□□ -1.61
VPS41-209ENST00000457055 OR2G6Q5TZ20 316 aa5□□□□□ -1.61
VPS41-209ENST00000457055 TRIQKQ629K1 86 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PLAG1Q6DJT9 500 aa5□□□□□ -1.61
VPS41-209ENST00000457055 FAHD2BQ6P2I3 314 aaPredicted RBP5□□□□□ -1.61
VPS41-209ENST00000457055 PRSS55Q6UWB4 352 aaPredicted RBP5□□□□□ -1.61
VPS41-209ENST00000457055 TMEM107Q6UX40 140 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CYHR1Q6ZMK1 362 aa5□□□□□ -1.61
VPS41-209ENST00000457055 C3P1Q6ZMU1 363 aa5□□□□□ -1.61
VPS41-209ENST00000457055 DEF8Q6ZN54 512 aa5□□□□□ -1.61
VPS41-209ENST00000457055 TECPR1Q7Z6L1 1165 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PLXDC1Q8IUK5 500 aa5□□□□□ -1.61
VPS41-209ENST00000457055 LACC1Q8IV20 430 aa5□□□□□ -1.61
VPS41-209ENST00000457055 AQP12AQ8IXF9 295 aa5□□□□□ -1.61
VPS41-209ENST00000457055 SEMA6DQ8NFY4 1073 aa5□□□□□ -1.61
VPS41-209ENST00000457055 M1APQ8TC57 530 aa5□□□□□ -1.61
VPS41-209ENST00000457055 SPPL2AQ8TCT8 520 aa5□□□□□ -1.61
VPS41-209ENST00000457055 BPIFB1Q8TDL5 484 aa5□□□□□ -1.61
VPS41-209ENST00000457055 GDPD5Q8WTR4 605 aa5□□□□□ -1.61
VPS41-209ENST00000457055 NTN5Q8WTR8 489 aaPredicted RBP5□□□□□ -1.61
VPS41-209ENST00000457055 DAZLQ92904 295 aaKnown RBP5□□□□□ -1.61
VPS41-209ENST00000457055 TMBIM1Q969X1 311 aa5□□□□□ -1.61
VPS41-209ENST00000457055 FUBP1Q96AE4 644 aaKnown RBP5□□□□□ -1.61
VPS41-209ENST00000457055 MMABQ96EY8 250 aaPredicted RBP5□□□□□ -1.61
VPS41-209ENST00000457055 FAHD2AQ96GK7 314 aa5□□□□□ -1.61
VPS41-209ENST00000457055 CPB2Q96IY4 423 aa5□□□□□ -1.61
VPS41-209ENST00000457055 HARBI1Q96MB7 349 aa5□□□□□ -1.61
VPS41-209ENST00000457055 ACCSQ96QU6 501 aa5□□□□□ -1.61
VPS41-209ENST00000457055 OR2A14Q96R47 310 aa5□□□□□ -1.61
VPS41-209ENST00000457055 RAB40CQ96S21 281 aa5□□□□□ -1.61
VPS41-209ENST00000457055 MAP3K3Q99759 626 aa5□□□□□ -1.61
VPS41-209ENST00000457055 NEURL2Q9BR09 285 aa5□□□□□ -1.61
VPS41-209ENST00000457055 ZNF559Q9BR84 538 aa5□□□□□ -1.61
VPS41-209ENST00000457055 WRAP53Q9BUR4 548 aaKnown RBP5□□□□□ -1.61
VPS41-209ENST00000457055 IFT27Q9BW83 186 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms