RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 HCRTR2O43614 444 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 FCMRO60667 390 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 KRT75O95678 551 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 GSNP06396 782 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 POU3F2P20265 443 aaPredicted RBP15.66■□□□□ 0.1
USP39-208ENST00000455732 TCEA1P23193 301 aaKnown RBP15.66■□□□□ 0.1
USP39-208ENST00000455732 STARP49675 285 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 CASP9P55211 416 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 ZNF117Q03924 483 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 SQLEQ14534 574 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 PLPPR5Q32ZL2 321 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 HSP90B2PQ58FF3 399 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 MEX3BQ6ZN04 569 aaKnown RBP15.66■□□□□ 0.1
USP39-208ENST00000455732 PHOSPHO1Q8TCT1 267 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 ZFP90Q8TF47 636 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 RAB8BQ92930 207 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 VPS33AQ96AX1 596 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 ROPN1LQ96C74 230 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 TRIB1Q96RU8 372 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 SAP130Q9H0E3 1048 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 SLC6A13Q9NSD5 602 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 MED17Q9NVC6 651 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 CLCF1Q9UBD9 225 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 LIPT1Q9Y234 373 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 AP4B1Q9Y6B7 739 aa15.66■□□□□ 0.1
USP39-208ENST00000455732 ANKHD1Q8IWZ3 2542 aaKnown RBP15.65■□□□□ 0.1
USP39-208ENST00000455732 CSMD2Q7Z408 3487 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 MPDZO75970 2070 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 PRAMEF27A3QJZ7 478 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 SERINC4A6NH21 518 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 ATP8B1O43520 1251 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 TNFRSF21O75509 655 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 UGT2B17O75795 530 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 C1QCP02747 245 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 ZNF41P51814 821 aaPredicted RBP15.65■□□□□ 0.1
USP39-208ENST00000455732 MVDP53602 400 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 SLC25A35Q3KQZ1 300 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 PDZK1Q5T2W1 519 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 TYW3Q6IPR3 259 aaKnown RBP15.65■□□□□ 0.1
USP39-208ENST00000455732 BLOC1S3Q6QNY0 202 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 DNAJC14Q6Y2X3 702 aaPredicted RBP15.65■□□□□ 0.1
USP39-208ENST00000455732 FRRS1Q6ZNA5 592 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 FUNDC1Q8IVP5 155 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 NAXEQ8NCW5 288 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 TOR1AIP2Q8NFQ8 470 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 TNIP2Q8NFZ5 429 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 GTF2H4Q92759 462 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 SH3YL1Q96HL8 342 aaPredicted RBP15.65■□□□□ 0.1
USP39-208ENST00000455732 TRNT1Q96Q11 434 aaKnown RBP15.65■□□□□ 0.1
USP39-208ENST00000455732 KCNE5Q9UJ90 142 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 MKLN1Q9UL63 735 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 ICAM5Q9UMF0 924 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 VDAC3Q9Y277 283 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 ZNF337Q9Y3M9 751 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 WDR45Q9Y484 360 aa15.65■□□□□ 0.1
USP39-208ENST00000455732 CENPVL1A0A0U1RR11 272 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 CLCA1A8K7I4 914 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 GMFGO60234 142 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 EIF4E2O60573 245 aaKnown RBP15.64■□□□□ 0.09
USP39-208ENST00000455732 ANKRD17O75179 2603 aaKnown RBP15.64■□□□□ 0.09
USP39-208ENST00000455732 IL2RAP01589 272 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 LINGO3P0C6S8 592 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 UBL4AP11441 157 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 HOXB9P17482 250 aaPredicted RBP15.64■□□□□ 0.09
USP39-208ENST00000455732 PSMA4P25789 261 aaKnown RBP15.64■□□□□ 0.09
USP39-208ENST00000455732 P2RX1P51575 399 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 EEFSECP57772 596 aaKnown RBP15.64■□□□□ 0.09
USP39-208ENST00000455732 HPCAP84074 193 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 SRYQ05066 204 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 GPR68Q15743 365 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 POMZP3Q6PJE2 187 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 CBLN3Q6UW01 205 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 ZNF619Q8N2I2 560 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 MEIOBQ8N635 442 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 ZNF614Q8N883 585 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 OR5M1Q8NGP8 315 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 RFWD2Q8NHY2 731 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 WNT2BQ93097 391 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 ARSGQ96EG1 525 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 C14orf79Q96F83 325 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 ZFP3Q96NJ6 502 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 TM9SF2Q99805 663 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 KLHDC3Q9BQ90 382 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 RABEP2Q9H5N1 569 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 ZNF385DQ9H6B1 395 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 TPT1P8Q9HAU6 139 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 NPHS2Q9NP85 383 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 SLC52A3Q9NQ40 469 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 ZNF629Q9UEG4 869 aaPredicted RBP15.64■□□□□ 0.09
USP39-208ENST00000455732 CARD8Q9Y2G2 431 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 OTOGQ6ZRI0 2925 aa15.64■□□□□ 0.09
USP39-208ENST00000455732 H3BML4 177 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 GTPBP1O00178 669 aaKnown RBP15.63■□□□□ 0.09
USP39-208ENST00000455732 ZNF264O43296 627 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 OIP5O43482 229 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 DNAJA2O60884 412 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 ANP32DO95626 131 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 ELK4P28324 431 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 SSTR2P30874 369 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 EIF1P41567 113 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms