RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 WWP2O00308 870 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 ZNF749O43361 778 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 NUDT21O43809 227 aaKnown RBP12.63□□□□□ -0.39
CLK3-203ENST00000454830 PFDN1O60925 122 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 NUDT14O95848 222 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 ADRA2AP08913 450 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 TGFBR2P37173 567 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 CRYZQ08257 329 aaKnown RBP12.63□□□□□ -0.39
CLK3-203ENST00000454830 MEDAGQ5VYS4 303 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 ARHGAP22Q7Z5H3 698 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 ZNF321PQ8N8H1 164 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 TMEM163Q8TC26 289 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 BPIFA2Q96DR5 249 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 CENPOQ9BU64 300 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 SPIN1Q9Y657 262 aaPredicted RBP12.63□□□□□ -0.39
CLK3-203ENST00000454830 K7ESF4 209 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 PAICSP22234 425 aaKnown RBP12.63□□□□□ -0.39
CLK3-203ENST00000454830 FPR3P25089 353 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 MTNR1AP48039 350 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 SERTAD2Q14140 314 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 OGFOD3Q6PK18 319 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 SLC46A3Q7Z3Q1 461 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 CPOQ8IVL8 374 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 ZFP41Q8N8Y5 198 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 OR2I1PQ8NGU4 316 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 OR4C3Q8NH37 302 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 GUCD1Q96NT3 240 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 G6PC3Q9BUM1 346 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 TWSG1Q9GZX9 223 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 MED20Q9H944 212 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 ZNF304Q9HCX3 659 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 SIDT1Q9NXL6 827 aaKnown RBP12.63□□□□□ -0.39
CLK3-203ENST00000454830 CCRL2O00421 344 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 RAB36O95755 333 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 CSF2RBP32927 897 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 CDK5Q00535 292 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 LPAL2Q16609 132 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 PERM1Q5SV97 790 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 OR2G6Q5TZ20 316 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 PLBD1Q6P4A8 553 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 NPSR1Q6W5P4 371 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 WDR88Q6ZMY6 472 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 OR4Q3Q8NH05 313 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 DTNBP1Q96EV8 351 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 VSTM2LQ96N03 204 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 ZNF559Q9BR84 538 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 MND1Q9BWT6 205 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 UCK1Q9HA47 277 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 HMG20AQ9NP66 347 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 PRODH2Q9UF12 536 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 GMEB2Q9UKD1 530 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 CDH10Q9Y6N8 788 aa12.63□□□□□ -0.39
CLK3-203ENST00000454830 ARHGAP33O14559 1287 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 HYAL3O43820 417 aaPredicted RBP12.62□□□□□ -0.39
CLK3-203ENST00000454830 MAKP20794 623 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 S1PR1P21453 382 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 GRK5P34947 590 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 PGGHGQ32M88 737 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 ZNF829Q3KNS6 432 aaPredicted RBP12.62□□□□□ -0.39
CLK3-203ENST00000454830 KLHL22Q53GT1 634 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 ZNF620Q6ZNG0 422 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 FAM26EQ8N5C1 309 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 KBTBD8Q8NFY9 601 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 OR4F15Q8NGB8 312 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 GATAD2BQ8WXI9 593 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 DACH2Q96NX9 599 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 ANKRD19PQ9H560 264 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 HHATLQ9HCP6 504 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 TESQ9UGI8 421 aaKnown RBP12.62□□□□□ -0.39
CLK3-203ENST00000454830 E9PQ18 207 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 TEKQ02763 1124 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 MXD1Q05195 221 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 TIMM50Q3ZCQ8 353 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 MED25Q71SY5 747 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 OAFQ86UD1 273 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 AMER2Q8N7J2 671 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 BCORP1Q8N888 145 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 OR51G2Q8NGK0 314 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 OR52I1Q8NGK6 324 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 SIGLEC11Q96RL6 698 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 ADOQ96SZ5 270 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 FKBP14Q9NWM8 211 aa12.62□□□□□ -0.39
CLK3-203ENST00000454830 CLDN25C9JDP6 229 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 H0YIG0 161 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 PRODHO43272 600 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 CSO75390 466 aaKnown RBP12.61□□□□□ -0.39
CLK3-203ENST00000454830 RPL4P36578 427 aaKnown RBP12.61□□□□□ -0.39
CLK3-203ENST00000454830 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 CD300LDQ6UXZ3 194 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 CYB561A3Q8NBI2 242 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 BBS1Q8NFJ9 593 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 CLDN23Q96B33 292 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 CDCA4Q9BXL8 241 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 DUSP15Q9H1R2 295 aaPredicted RBP12.61□□□□□ -0.39
CLK3-203ENST00000454830 WDR70Q9NW82 654 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 RGS5O15539 181 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 PSMA1P25786 263 aaKnown RBP12.61□□□□□ -0.39
CLK3-203ENST00000454830 ITPKBP27987 946 aa12.61□□□□□ -0.39
CLK3-203ENST00000454830 GPR3P46089 330 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms