RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 AHCTF1Q8WYP5 2266 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 CLDN4O14493 209 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 CDC42EP2O14613 210 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 OR5F1O95221 314 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 ELOAQ14241 798 aaKnown RBP11.14□□□□□ -0.63
SMPD4-213ENST00000454468 OXA1LQ15070 435 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 SDR9C7Q8NEX9 313 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 TMEM163Q8TC26 289 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 DGAT2Q96PD7 388 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 MRPS33Q9Y291 106 aaKnown RBP11.14□□□□□ -0.63
SMPD4-213ENST00000454468 SLCO1B1Q9Y6L6 691 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 HCN1O60741 890 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 TSC22D2O75157 780 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 SLITRK5O94991 958 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 GPR75O95800 540 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 HLA-DQA2P01906 255 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 CT62P0C5K7 136 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 ACP2P11117 423 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 PSKH1P11801 424 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 RPTNQ6XPR3 784 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 ZAR1Q86SH2 424 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 OR52E2Q8NGJ4 325 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 BPIFA2Q96DR5 249 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 VMP1Q96GC9 406 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 FOXN4Q96NZ1 517 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 NEDD4LQ96PU5 975 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 WACQ9BTA9 647 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 MROQ9BYG7 248 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 FN3KQ9H479 309 aa11.14□□□□□ -0.63
SMPD4-213ENST00000454468 HINT3Q9NQE9 182 aaKnown RBP11.14□□□□□ -0.63
SMPD4-213ENST00000454468 RP1P56715 2156 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 CCDC182A6NF36 153 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 HRKO00198 91 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 CASC3O15234 703 aaKnown RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 SCG5P05408 212 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 TEAD1P28347 426 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 MLLT3P42568 568 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 TSPAN31Q12999 210 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 EIPR1Q53HC9 387 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 MEDAGQ5VYS4 303 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 FRRS1Q6ZNA5 592 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 SAMD14Q8IZD0 417 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 ARL14Q8N4G2 192 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 PROKR2Q8NFJ6 384 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 FBLIM1Q8WUP2 373 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 SNX33Q8WV41 574 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 MOAP1Q96BY2 351 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 OR2A5Q96R48 311 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 NEURL2Q9BR09 285 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 NRSN2Q9GZP1 204 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 NT5DC2Q9H857 520 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 MUTYHQ9UIF7 546 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 FBXL4Q9UKA2 621 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 CMAHPQ9Y471 501 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 NOX1Q9Y5S8 564 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 ARID1AO14497 2285 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 TRAPPC13A5PLN9 417 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 RHPN2P1A8MT19 583 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 CSTAP01040 98 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF45Q02386 682 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF770Q6IQ21 691 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 SYT9Q86SS6 491 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 MCATQ8IVS2 390 aaKnown RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 OR4Q3Q8NH05 313 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF671Q8TAW3 534 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 SLC25A36Q96CQ1 311 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 TNFRSF13CQ96RJ3 184 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 PRTFDC1Q9NRG1 225 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 MAN2C1Q9NTJ4 1040 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 NKIRAS2Q9NYR9 191 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 CLEC1BQ9P126 229 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 A0A1W2PQ09 198 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 GABRB1P18505 474 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 DRD1P21728 446 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 AHCYP23526 432 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 TALDO1P37837 337 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 CD83Q01151 205 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 DSG2Q14126 1118 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 ZIC1Q15915 447 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 PGGHGQ32M88 737 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 NANOGP1Q8N7R0 232 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 CDCA3Q99618 268 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 CDCA4Q9BXL8 241 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 POLDIP3Q9BY77 421 aaKnown RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 PITHD1Q9GZP4 211 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 ENKD1Q9H0I2 346 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 UBQLN3Q9H347 655 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 BEX1Q9HBH7 125 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 TAS2R7Q9NYW3 318 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 DHCR7Q9UBM7 475 aaKnown RBP11.13□□□□□ -0.63
SMPD4-213ENST00000454468 KLF15Q9UIH9 416 aa11.13□□□□□ -0.63
SMPD4-213ENST00000454468 FAM240BA0A1B0GVZ2 78 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 C2CD4DB7Z1M9 353 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 TAF4O00268 1085 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
SMPD4-213ENST00000454468 HPGDSO60760 199 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 EPPINO95925 133 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 HMGN1P05114 100 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms