RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CHI3L1P36222 383 aaPredicted RBP10.05□□□□□ -0.8
LINC00342-202ENST00000448494 RAD52P43351 418 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 CRKLP46109 303 aaKnown RBP10.05□□□□□ -0.8
LINC00342-202ENST00000448494 CDKN1BP46527 198 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 AP3S2P59780 193 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 HGFACQ04756 655 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 SRSF11Q05519 484 aaKnown RBP10.05□□□□□ -0.8
LINC00342-202ENST00000448494 RBM39Q14498 530 aaKnown RBP10.05□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF345Q14585 488 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 RBBP7Q16576 425 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 MPPE1Q53F39 396 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF789Q5FWF6 425 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 KCNRGQ8N5I3 272 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 BOLLQ8N9W6 283 aaKnown RBP10.05□□□□□ -0.8
LINC00342-202ENST00000448494 OR10D4PQ8NGN7 298 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 THEM6Q8WUY1 208 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 TMEM176AQ96HP8 235 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 MENTQ9BUN1 341 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 NT5C1AQ9BXI3 368 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 DUSP16Q9BY84 665 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 MAGEB5Q9BZ81 275 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 SLC6A13Q9NSD5 602 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 MAN2C1Q9NTJ4 1040 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 CALML5Q9NZT1 146 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 GRHPRQ9UBQ7 328 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 SLC2A6Q9UGQ3 507 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 FBXL4Q9UKA2 621 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 FLVCR2Q9UPI3 526 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 TBC1D3DA0A087WVF3 549 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TBC1D3IA0A087WXS9 549 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TBC1D3EA0A087X179 549 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TBC1D3KA0A087X1G2 549 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 IRGMA1A4Y4 181 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 ARRDC5A6NEK1 342 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TBC1D3FA6NER0 549 aaPredicted RBP10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SUPT3HB4E1H0 165 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TBC1D3LB9A6J9 549 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 RPL36A-HNRNPH2H7BZ11 118 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 CTDSPLO15194 276 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 BCL2L11O43521 198 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 PMP2P02689 132 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 OPN1LWP04000 364 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 EPXP11678 715 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 FDXRP22570 491 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 GABRR2P28476 465 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF280AP59817 542 aaPredicted RBP10.04□□□□□ -0.8
LINC00342-202ENST00000448494 VEZF1Q14119 521 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TMEM95Q3KNT9 176 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TBC1D3CQ6IPX1 549 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SLC25A24Q6NUK1 477 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TBC1D3Q8IZP1 549 aaPredicted RBP10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SAMD12Q8N8I0 201 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SDR9C7Q8NEX9 313 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 OR56B1Q8NGI3 324 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 OR52I1Q8NGK6 324 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 UBA3Q8TBC4 463 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 WDR89Q96FK6 387 aaPredicted RBP10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SLC6A18Q96N87 628 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF382Q96SR6 550 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TBL1YQ9BQ87 522 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 ACBD6Q9BR61 282 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TM6SF2Q9BZW4 377 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 OR10A4Q9H209 315 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 UBQLN3Q9H347 655 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 FAM212BQ9NTI7 297 aaPredicted RBP10.04□□□□□ -0.8
LINC00342-202ENST00000448494 DNAJC27Q9NZQ0 273 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 PCTPQ9UKL6 214 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 ZDHHC8Q9ULC8 765 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 JAG2Q9Y219 1238 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 PCDHB1Q9Y5F3 818 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 RAI2Q9Y5P3 530 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SHISA3A0PJX4 238 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 UBE2QL1A1L167 161 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 CLIC1O00299 241 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 ARPC1BO15143 372 aaKnown RBP10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SUV39H1O43463 412 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 MOSPD3O75425 235 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 CD79AP11912 226 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 INSRRP14616 1297 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 MAS1LP35410 378 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 NRG3P56975 720 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 RAB8AP61006 207 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SLC14A1Q13336 389 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 TMEM132DQ14C87 1099 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SURF1Q15526 300 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 KCNA10Q16322 511 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SLC5A12Q1EHB4 618 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SLC10A6Q3KNW5 377 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 OR10K2Q6IF99 312 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 C11orf88Q6PI97 169 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 FBXO46Q6PJ61 603 aaPredicted RBP10.04□□□□□ -0.8
LINC00342-202ENST00000448494 DEGS2Q6QHC5 323 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 WDR53Q7Z5U6 358 aaPredicted RBP10.04□□□□□ -0.8
LINC00342-202ENST00000448494 C19orf47Q8N9M1 422 aaKnown RBP10.04□□□□□ -0.8
LINC00342-202ENST00000448494 STAG3L4Q8TBR4 150 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 NEK7Q8TDX7 302 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 GBF1Q92538 1859 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 SCLYQ96I15 445 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 IL4I1Q96RQ9 567 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 ELOVL4Q9GZR5 314 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms