RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GINS1Q14691 196 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 FRG2Q64ET8 278 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 C16orf59Q7L2K0 433 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 NKAIN4Q8IVV8 208 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 ZFP41Q8N8Y5 198 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 THAP6Q8TBB0 222 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 ZFPM2Q8WW38 1151 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 AUTS2Q8WXX7 1259 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 RFKQ969G6 155 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 FRG2BQ96QU4 278 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 FUZQ9BT04 418 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 ADGRE3Q9BY15 652 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 TM6SF2Q9BZW4 377 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 ABRACLQ9P1F3 81 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 PTGFRNQ9P2B2 879 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 FKBPLQ9UIM3 349 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 ANAPC1Q9H1A4 1944 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 OR6C68A6NDL8 312 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 REM1O75628 298 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 VIPR1P32241 457 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 SOX18P35713 384 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 CAPZA1P52907 286 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 ZXDBP98169 803 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 MPPED2Q15777 294 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 ZNF565Q8N9K5 539 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 OR51Q1Q8NH59 317 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 SLC22A12Q96S37 553 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 MGME1Q9BQP7 344 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 GPATCH2Q9NW75 528 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 NFKBIL1Q9UBC1 381 aaPredicted RBP17.93■□□□□ 0.46
HMGA1-205ENST00000447654 METTL1Q9UBP6 276 aaKnown RBP17.93■□□□□ 0.46
HMGA1-205ENST00000447654 MEX3AA1L020 520 aaKnown RBP17.93■□□□□ 0.46
HMGA1-205ENST00000447654 ZNF749O43361 778 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 RNF13O43567 381 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 ABLIM3O94929 683 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 LBX1P52954 281 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 EEF1A1P68104 462 aaKnown RBP17.93■□□□□ 0.46
HMGA1-205ENST00000447654 TLE2Q04725 743 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 CACNG1Q06432 222 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 EEF1A1P5Q5VTE0 462 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 C3orf33Q6P1S2 294 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 TMEM150AQ86TG1 271 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 HDDC3Q8N4P3 179 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 ZNF461Q8TAF7 563 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 VOPP1Q96AW1 172 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 C14orf105Q9NVL8 296 aa17.93■□□□□ 0.46
HMGA1-205ENST00000447654 SEMA7AO75326 666 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 CD160O95971 181 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 IGHA1P01876 353 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 EIF2S3P41091 472 aaKnown RBP17.92■□□□□ 0.46
HMGA1-205ENST00000447654 DGKEP52429 567 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 SNRPEP62304 92 aaKnown RBP17.92■□□□□ 0.46
HMGA1-205ENST00000447654 SGCAQ16586 387 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 GPRC6AQ5T6X5 926 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 PTRHD1Q6GMV3 140 aaKnown RBP17.92■□□□□ 0.46
HMGA1-205ENST00000447654 ADNP2Q6IQ32 1131 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 SMARCD3Q6STE5 483 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 RXFP4Q8TDU9 374 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 THEM6Q8WUY1 208 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 SORCS1Q8WY21 1168 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 BHLHE41Q9C0J9 482 aaPredicted RBP17.92■□□□□ 0.46
HMGA1-205ENST00000447654 MAGEH1Q9H213 219 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 BRD9Q9H8M2 597 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 BEX1Q9HBH7 125 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 PRMT8Q9NR22 394 aaPredicted RBP17.92■□□□□ 0.46
HMGA1-205ENST00000447654 CTPS2Q9NRF8 586 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 RHCGQ9UBD6 479 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 ZNF69Q9UC07 566 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 EXOGQ9Y2C4 368 aaKnown RBP17.92■□□□□ 0.46
HMGA1-205ENST00000447654 PCDHB9Q9Y5E1 797 aa17.92■□□□□ 0.46
HMGA1-205ENST00000447654 ANKRD61A6NGH8 418 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 IQCF5A8MTL0 148 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 PGRMC2O15173 223 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 EIF4E2O60573 245 aaKnown RBP17.91■□□□□ 0.46
HMGA1-205ENST00000447654 POP7O75817 140 aaKnown RBP17.91■□□□□ 0.46
HMGA1-205ENST00000447654 RB1P06400 928 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 ZNF7P17097 686 aaPredicted RBP17.91■□□□□ 0.46
HMGA1-205ENST00000447654 CR2P20023 1033 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 GKP32189 559 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 GDNFP39905 211 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 SLC11A2P49281 568 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 CDH4P55283 916 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 LIM2P55344 173 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 STARD6P59095 220 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 SMCO1Q147U7 214 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 CBLN2Q8IUK8 224 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 WDSUB1Q8N9V3 476 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 C2CD4CQ8TF44 421 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 EBPLQ9BY08 206 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 HRASLSQ9HDD0 168 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 NKIRAS2Q9NYR9 191 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 AFF4Q9UHB7 1163 aaKnown RBP17.91■□□□□ 0.46
HMGA1-205ENST00000447654 PLEKHA6Q9Y2H5 1048 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 A0A0D9SG52 128 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 TTLL8A6PVC2 850 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 FAM227AF5H4B4 570 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 TO15178 435 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 PAK4O96013 591 aaPredicted RBP17.91■□□□□ 0.46
HMGA1-205ENST00000447654 OR12D1P0DN82 309 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 GSTM3P21266 225 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms