RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 ATP6V1C1P21283 382 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 ME2P23368 584 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 GRNP28799 593 aaKnown RBP12.84□□□□□ -0.35
SREBF1-207ENST00000447641 PTGS2P35354 604 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 CA7P43166 264 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 ATP12AP54707 1039 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 BNIP2Q12982 314 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 MAPK11Q15759 364 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 ZNF141Q15928 474 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 NHSL2Q5HYW2 709 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 EMC4Q5J8M3 183 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
SREBF1-207ENST00000447641 ATAD3BQ5T9A4 648 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 C1orf146Q5VVC0 180 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 OR5M10Q6IEU7 315 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 DNAJC14Q6Y2X3 702 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-207ENST00000447641 RETREG3Q86VR2 466 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 DOLPP1Q86YN1 238 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 FAM83FQ8NEG4 500 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-207ENST00000447641 OR2M3Q8NG83 312 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 FAM57AQ8TBR7 257 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 OIT3Q8WWZ8 545 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 AURKBQ96GD4 344 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-207ENST00000447641 TRNT1Q96Q11 434 aaKnown RBP12.84□□□□□ -0.35
SREBF1-207ENST00000447641 RAD21L1Q9H4I0 556 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 VAPAQ9P0L0 249 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 SPRR3Q9UBC9 169 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 LIPT1Q9Y234 373 aa12.84□□□□□ -0.35
SREBF1-207ENST00000447641 MED12Q93074 2177 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 EVPLLA8MZ36 301 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 ANKRD65E5RJM6 399 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 CLIC1O00299 241 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 FBP2O00757 339 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 KIAA0513O60268 411 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 HOXB6P17509 224 aaKnown RBP12.83□□□□□ -0.36
SREBF1-207ENST00000447641 SRD5A2P31213 254 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 ADH7P40394 386 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 ANXA11P50995 505 aaKnown RBP12.83□□□□□ -0.36
SREBF1-207ENST00000447641 RIPK1Q13546 671 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 RGNQ15493 299 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 CD226Q15762 336 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 C3AR1Q16581 482 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 FLYWCH1Q4VC44 716 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 TYW3Q6IPR3 259 aaKnown RBP12.83□□□□□ -0.36
SREBF1-207ENST00000447641 C16orf62Q7Z3J2 963 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 PNPT1Q8TCS8 783 aaKnown RBP12.83□□□□□ -0.36
SREBF1-207ENST00000447641 PMM1Q92871 262 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 CDRT15Q96T59 188 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 SLC6A15Q9H2J7 730 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 DSN1Q9H410 356 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 MED11Q9P086 117 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 PPP4R1LQ9P1A2 415 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 SUCOQ9UBS9 1254 aaKnown RBP12.83□□□□□ -0.36
SREBF1-207ENST00000447641 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.83□□□□□ -0.36
SREBF1-207ENST00000447641 DTNAQ9Y4J8 743 aa12.83□□□□□ -0.36
SREBF1-207ENST00000447641 A0A1B0GUH1 482 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 SCDO00767 359 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 BCKDKO14874 412 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 NDUFB5O43674 189 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 TNFRSF21O75509 655 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 UGT2B17O75795 530 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 TRAPPC6AO75865 159 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 TFPTP0C1Z6 253 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 ETFAP13804 333 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 GPX2P18283 190 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 MSX1P28360 303 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 GFRA1P56159 465 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 DSCR4P56555 118 aaPredicted RBP12.82□□□□□ -0.36
SREBF1-207ENST00000447641 RIPPLY3P57055 190 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 EEFSECP57772 596 aaKnown RBP12.82□□□□□ -0.36
SREBF1-207ENST00000447641 TRAP1Q12931 704 aaKnown RBP12.82□□□□□ -0.36
SREBF1-207ENST00000447641 SYPL1Q16563 259 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 GLYR1Q49A26 553 aaPredicted RBP12.82□□□□□ -0.36
SREBF1-207ENST00000447641 GXYLT1Q4G148 440 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 EIPR1Q53HC9 387 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 VASNQ6EMK4 673 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 FRRS1Q6ZNA5 592 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 OLIG3Q7RTU3 272 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 MISPQ8IVT2 679 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 ANKFN1Q8N957 763 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 ZNF527Q8NB42 609 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 ZG16BQ96DA0 208 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 C1GALT1C1Q96EU7 318 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 CGREF1Q99674 301 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 GPATCH1Q9BRR8 931 aaKnown RBP12.82□□□□□ -0.36
SREBF1-207ENST00000447641 SPATA9Q9BWV2 254 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 SLC38A1Q9H2H9 487 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 LDAHQ9H6V9 325 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 THUMPD1Q9NXG2 353 aaKnown RBP12.82□□□□□ -0.36
SREBF1-207ENST00000447641 TMEM181Q9P2C4 612 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 MKLN1Q9UL63 735 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 HEATR5AQ86XA9 2040 aa12.82□□□□□ -0.36
SREBF1-207ENST00000447641 PHF3Q92576 2039 aaKnown RBP12.81□□□□□ -0.36
SREBF1-207ENST00000447641 NPIPA5A0A0B4J1W7 369 aa12.81□□□□□ -0.36
SREBF1-207ENST00000447641 CENPVL1A0A0U1RR11 272 aa12.81□□□□□ -0.36
SREBF1-207ENST00000447641 NPIPA7E9PJI5 369 aa12.81□□□□□ -0.36
SREBF1-207ENST00000447641 LRRTM2O43300 516 aa12.81□□□□□ -0.36
SREBF1-207ENST00000447641 H6PDO95479 791 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms