RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 KLK11Q9UBX7 282 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 HTTP42858 3142 aa13□□□□□ -0.33
VPS52-212ENST00000445902 DENND4CQ5VZ89 1909 aa13□□□□□ -0.33
VPS52-212ENST00000445902 FEZF1A0PJY2 475 aa13□□□□□ -0.33
VPS52-212ENST00000445902 CDC42EP2O14613 210 aa13□□□□□ -0.33
VPS52-212ENST00000445902 PPM1DO15297 605 aa13□□□□□ -0.33
VPS52-212ENST00000445902 IGF2P01344 180 aa13□□□□□ -0.33
VPS52-212ENST00000445902 UCHL1P09936 223 aa13□□□□□ -0.33
VPS52-212ENST00000445902 PSMB1P20618 241 aaKnown RBP13□□□□□ -0.33
VPS52-212ENST00000445902 C4BPBP20851 252 aa13□□□□□ -0.33
VPS52-212ENST00000445902 CCR9P51686 369 aa13□□□□□ -0.33
VPS52-212ENST00000445902 OR12D2P58182 307 aa13□□□□□ -0.33
VPS52-212ENST00000445902 PITPNAQ00169 270 aa13□□□□□ -0.33
VPS52-212ENST00000445902 LRRC56Q8IYG6 542 aaPredicted RBP13□□□□□ -0.33
VPS52-212ENST00000445902 OR1S1Q8NH92 325 aa13□□□□□ -0.33
VPS52-212ENST00000445902 LGALS14Q8TCE9 139 aa13□□□□□ -0.33
VPS52-212ENST00000445902 LRRC46Q96FV0 321 aa13□□□□□ -0.33
VPS52-212ENST00000445902 GINS4Q9BRT9 223 aa13□□□□□ -0.33
VPS52-212ENST00000445902 NEUROD4Q9HD90 331 aa13□□□□□ -0.33
VPS52-212ENST00000445902 GLS2Q9UI32 602 aa13□□□□□ -0.33
VPS52-212ENST00000445902 HEATR5BQ9P2D3 2071 aa13□□□□□ -0.33
VPS52-212ENST00000445902 AIPO00170 330 aa13□□□□□ -0.33
VPS52-212ENST00000445902 HOXB3P14651 431 aaPredicted RBP13□□□□□ -0.33
VPS52-212ENST00000445902 S100A11P31949 105 aa13□□□□□ -0.33
VPS52-212ENST00000445902 ZNF750Q32MQ0 723 aa13□□□□□ -0.33
VPS52-212ENST00000445902 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
VPS52-212ENST00000445902 HACD4Q5VWC8 232 aa13□□□□□ -0.33
VPS52-212ENST00000445902 SEZ6L2Q6UXD5 910 aa13□□□□□ -0.33
VPS52-212ENST00000445902 TMUB2Q71RG4 321 aa13□□□□□ -0.33
VPS52-212ENST00000445902 LINC00471Q8N535 108 aa13□□□□□ -0.33
VPS52-212ENST00000445902 SCARB1Q8WTV0 552 aa13□□□□□ -0.33
VPS52-212ENST00000445902 BCL7CQ8WUZ0 217 aaPredicted RBP13□□□□□ -0.33
VPS52-212ENST00000445902 OSTF1Q92882 214 aa13□□□□□ -0.33
VPS52-212ENST00000445902 MRPS24Q96EL2 167 aaKnown RBP13□□□□□ -0.33
VPS52-212ENST00000445902 C16orf58Q96GQ5 468 aa13□□□□□ -0.33
VPS52-212ENST00000445902 C12orf57Q99622 126 aa13□□□□□ -0.33
VPS52-212ENST00000445902 MTG2Q9H4K7 406 aa13□□□□□ -0.33
VPS52-212ENST00000445902 SCN2AQ99250 2005 aa13□□□□□ -0.33
VPS52-212ENST00000445902 XIRP2A4UGR9 3374 aa13□□□□□ -0.33
VPS52-212ENST00000445902 SLC5A10A0PJK1 596 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 ANTXRLA6NF34 631 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 TMPRSS11DO60235 418 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 LDOC1O95751 146 aaPredicted RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 TBX6O95947 436 aaPredicted RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 SERPIND1P05546 499 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 ASGR1P07306 291 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 PYCR1P32322 319 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 C18orf63Q68DL7 685 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 FAM83HQ6ZRV2 1179 aaPredicted RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 OR52I2Q8NH67 350 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 HERVK_113Q902F9 699 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 NARS2Q96I59 477 aaKnown RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 DERL3Q96Q80 235 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 SLC38A3Q99624 504 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 ENKD1Q9H0I2 346 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 NOX3Q9HBY0 568 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 NPDC1Q9NQX5 325 aaPredicted RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 ZMAT5Q9UDW3 170 aaKnown RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 PRKAG2Q9UGJ0 569 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 SLC13A4Q9UKG4 626 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 CA5BQ9Y2D0 317 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 PTP4A3O75365 173 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 KHDRBS3O75525 346 aaKnown RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 CLUP10909 449 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 IFNGR2P38484 337 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 FNTBP49356 437 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 RAG2P55895 527 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 TRAM2Q15035 370 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 ZNF311Q5JNZ3 666 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 METTL11BQ5VVY1 283 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 ZDHHC20Q5W0Z9 365 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 C22orf39Q6P5X5 142 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 TRMT11Q7Z4G4 463 aaKnown RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 OR5M1Q8NGP8 315 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 OR5J2Q8NH18 312 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 ZDHHC1Q8WTX9 485 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 C19orf43Q9BQ61 176 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 TEX12Q9BXU0 123 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 CCDC86Q9H6F5 360 aaKnown RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 NFKBIL1Q9UBC1 381 aaPredicted RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 SDC3O75056 442 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 DUSP11O75319 330 aaKnown RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 ERAL1O75616 437 aaKnown RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 TGM6O95932 706 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 GYPBP06028 91 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 HCCSP53701 268 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 PNLIPRP1P54315 467 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 PCBP4P57723 403 aaKnown RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 ERVK-25P63136 954 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 SHC2P98077 582 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 FAM74A1Q5RGS3 127 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 OR2T33Q8NG76 320 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 HAVCR2Q8TDQ0 301 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 SMIM4Q8WVI0 70 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 GHSRQ92847 366 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 ARSGQ96EG1 525 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 MRTO4Q9UKD2 239 aaKnown RBP12.99□□□□□ -0.33
VPS52-212ENST00000445902 ZMIZ1Q9ULJ6 1067 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 Q9Y3F1 56 aa12.99□□□□□ -0.33
VPS52-212ENST00000445902 EOMESO95936 686 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms