RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 RYDENQ9NUL5 291 aaKnown RBP15.72■□□□□ 0.11
LIME1-202ENST00000444951 ABCG2Q9UNQ0 655 aa15.72■□□□□ 0.11
LIME1-202ENST00000444951 ZNF232Q9UNY5 417 aa15.72■□□□□ 0.11
LIME1-202ENST00000444951 ZNF443Q9Y2A4 671 aaPredicted RBP15.72■□□□□ 0.11
LIME1-202ENST00000444951 GPC6Q9Y625 555 aaPredicted RBP15.72■□□□□ 0.11
LIME1-202ENST00000444951 PINLYPA6NC86 204 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 SERINC4A6NH21 518 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 H3BNH8 94 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 CDK2AP1O14519 115 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 ARPC2O15144 300 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 PEX1O43933 1283 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 NME2P1O60361 137 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 ZNF682O95780 498 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 LDLRP01130 860 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 NGFRP08138 427 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 PABPC4LP0CB38 370 aaKnown RBP15.71■□□□□ 0.11
LIME1-202ENST00000444951 CNR1P21554 472 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 NME2P22392 152 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 KDELR2P33947 212 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 PTGDSP41222 190 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 DMTNQ08495 405 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 BNIP2Q12982 314 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 ZNF169Q14929 603 aaPredicted RBP15.71■□□□□ 0.11
LIME1-202ENST00000444951 LARS2Q15031 903 aaKnown RBP15.71■□□□□ 0.11
LIME1-202ENST00000444951 SPATS1Q496A3 300 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 LIN52Q52LA3 116 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 ZNF787Q6DD87 383 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 SLC30A6Q6NXT4 461 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 CYP2R1Q6VVX0 501 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 ZNF836Q6ZNA1 936 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 YTHDF3Q7Z739 585 aaKnown RBP15.71■□□□□ 0.11
LIME1-202ENST00000444951 TMCO5AQ8N6Q1 288 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 TMEM178AQ8NBL3 297 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 OR10Q1Q8NGQ4 319 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 DUSP19Q8WTR2 217 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 TAMM41Q96BW9 452 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 ARSGQ96EG1 525 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 BARD1Q99728 777 aaKnown RBP15.71■□□□□ 0.11
LIME1-202ENST00000444951 ANGPTL4Q9BY76 406 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 PROK2Q9HC23 129 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.71■□□□□ 0.11
LIME1-202ENST00000444951 RLIMQ9NVW2 624 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 PPP4R1LQ9P1A2 415 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 SUCOQ9UBS9 1254 aaKnown RBP15.71■□□□□ 0.11
LIME1-202ENST00000444951 MAGEL2Q9UJ55 1249 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 KLF13Q9Y2Y9 288 aaPredicted RBP15.71■□□□□ 0.11
LIME1-202ENST00000444951 IFT52Q9Y366 437 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 SNX13Q9Y5W8 968 aa15.71■□□□□ 0.11
LIME1-202ENST00000444951 DIDO1Q9BTC0 2240 aaKnown RBP15.71■□□□□ 0.1
LIME1-202ENST00000444951 ZGRF1Q86YA3 2104 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 WIPF3A6NGB9 483 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 ALG1L2C9J202 215 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 OIP5O43482 229 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 TPST1O60507 370 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 MFN2O95140 757 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 SERPINA1P01009 418 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 CSTAP01040 98 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 RPS4Y1P22090 263 aaKnown RBP15.7■□□□□ 0.1
LIME1-202ENST00000444951 MEOX1P50221 254 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 KCNJ10P78508 379 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 MS4A2Q01362 244 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 PMP22Q01453 160 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 GLIPR1L2Q4G1C9 344 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 CYBRD1Q53TN4 286 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 MRPL2Q5T653 305 aaKnown RBP15.7■□□□□ 0.1
LIME1-202ENST00000444951 CCDC80Q76M96 950 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 EIF3MQ7L2H7 374 aaKnown RBP15.7■□□□□ 0.1
LIME1-202ENST00000444951 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.7■□□□□ 0.1
LIME1-202ENST00000444951 PACS2Q86VP3 889 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 SPPL2CQ8IUH8 684 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 OR2M7Q8NG81 312 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 PMM1Q92871 262 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 SCMH1Q96GD3 660 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 TPD52L3Q96J77 140 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 FAM173AQ9BQD7 235 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 SDHAF3Q9NRP4 125 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 TUBA8Q9NY65 449 aaPredicted RBP15.7■□□□□ 0.1
LIME1-202ENST00000444951 SLC13A4Q9UKG4 626 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 CARD8Q9Y2G2 431 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 HRH3Q9Y5N1 445 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 WIF1Q9Y5W5 379 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 V9GYQ6 96 aa15.7■□□□□ 0.1
LIME1-202ENST00000444951 EML6Q6ZMW3 1958 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 A0A1W2PQD3 144 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 ANKUB1A6NFN9 424 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 ANKRD65E5RJM6 399 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 KLRC4-KLRK1H3BQV0 150 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 HCRTR2O43614 444 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 BCAS1O75363 584 aaPredicted RBP15.69■□□□□ 0.1
LIME1-202ENST00000444951 STAMBPO95630 424 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 IFNA14P01570 189 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 UBTFL6P0CB48 400 aaPredicted RBP15.69■□□□□ 0.1
LIME1-202ENST00000444951 UBL4AP11441 157 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 NID1P14543 1247 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 CCR4P51679 360 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 CRYBA2P53672 197 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 GAS1P54826 345 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 PLGLB1Q02325 96 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 SNTA1Q13424 505 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 TRIM25Q14258 630 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms