RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 EPXP11678 715 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 NID1P14543 1247 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 ZNF17P17021 662 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 IL12AP29459 219 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 SIRPAP78324 504 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 SORDQ00796 357 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 FOXF1Q12946 379 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 DAZAP2Q15038 168 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-203ENST00000444440 POU4F3Q15319 338 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 KLHL26Q53HC5 615 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 SPANXN4Q5MJ08 99 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 C22orf34Q6ZV56 151 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 LRRC34Q8IZ02 419 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 GTPBP8Q8N3Z3 284 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-203ENST00000444440 MEIOBQ8N635 442 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 CNEP1R1Q8N9A8 125 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 OR56A1Q8NGH5 318 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 PHOSPHO1Q8TCT1 267 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 ADAMTS15Q8TE58 950 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 ATP6V1G3Q96LB4 118 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 SDF2Q99470 211 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 MEAF6Q9HAF1 191 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 SLC24A3Q9HC58 644 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 NEUROD4Q9HD90 331 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 FOXD3Q9UJU5 478 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-203ENST00000444440 PACSIN3Q9UKS6 424 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 CLEC4AQ9UMR7 237 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 AP4B1Q9Y6B7 739 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 RNF103-CHMP3A0A140T963 221 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 PRAMEF27A3QJZ7 478 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 C7orf72A4D263 438 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 HMGB1P1B2RPK0 211 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-203ENST00000444440 SCDO00767 359 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 EIF1AYO14602 144 aaKnown RBP9.75□□□□□ -0.85
SF3A1-203ENST00000444440 TNFSF11O14788 317 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 CXCL13O43927 109 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 FCMRO60667 390 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 SNNO75324 88 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-203ENST00000444440 SMNDC1O75940 238 aaKnown RBP eCLIP9.75□□□□□ -0.85
SF3A1-203ENST00000444440 SOX30O94993 753 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 LBPP18428 481 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 CPOXP36551 454 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 CPA2P48052 419 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 ART1P52961 327 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 NME5P56597 212 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 UFM1P61960 85 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 PLAURQ03405 335 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 SPDYE7PQ495Y7 208 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 SPNS3Q6ZMD2 512 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 C6orf120Q7Z4R8 191 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 OR8J2Q8NGG1 315 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 OR4A15Q8NGL6 344 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 OR10D3Q8NH80 312 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 GOT1L1Q8NHS2 421 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-203ENST00000444440 B4GALNT2Q8NHY0 566 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 ACTRT2Q8TDY3 377 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 ARL8AQ96BM9 186 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 SLC35G5Q96KT7 338 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 DPY30Q9C005 99 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 OR51I1Q9H343 314 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 ACBD3Q9H3P7 528 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 PIGMQ9H3S5 423 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 WDR55Q9H6Y2 383 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-203ENST00000444440 CCM2LQ9NUG4 571 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-203ENST00000444440 ST6GALNAC2Q9UJ37 374 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 ICAM5Q9UMF0 924 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 CARD8Q9Y2G2 431 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 PLEKHA6Q9Y2H5 1048 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 ZNF175Q9Y473 711 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 TESMINQ9Y4I5 508 aa9.75□□□□□ -0.85
SF3A1-203ENST00000444440 A0A087WZY1 265 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 GOLGA8QA0A0J9YX86 632 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 SH3D21A4FU49 640 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 GOLGA8OA6NCC3 632 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 GOLGA8NF8WBI6 632 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 LINC01387J3KSC0 135 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 RNASET2O00584 256 aaKnown RBP9.74□□□□□ -0.85
SF3A1-203ENST00000444440 MSTNO14793 375 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 KLF11O14901 512 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 HDAC3O15379 428 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 CPSF4O95639 269 aaKnown RBP9.74□□□□□ -0.85
SF3A1-203ENST00000444440 HRGP04196 525 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 H2AFXP16104 143 aaPredicted RBP9.74□□□□□ -0.85
SF3A1-203ENST00000444440 KLK2P20151 261 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 MATN1P21941 496 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 LCN1P31025 176 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 CDKN2CP42773 168 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 EIF1AXP47813 144 aaKnown RBP9.74□□□□□ -0.85
SF3A1-203ENST00000444440 ATP12AP54707 1039 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 MAPK14Q16539 360 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 PDZK1Q5T2W1 519 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 OGFOD2Q6N063 350 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 CHMP1BQ7LBR1 199 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 ZNF550Q7Z398 422 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 MAVSQ7Z434 540 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 SPATA19Q7Z5L4 167 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 HMGN2P46Q86SG4 172 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 KIF18BQ86Y91 864 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 ZNF614Q8N883 585 aa9.74□□□□□ -0.85
SF3A1-203ENST00000444440 ZNF610Q8N9Z0 462 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms