RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 FAM83HQ6ZRV2 1179 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ARHGAP12Q8IWW6 846 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 NLGN4XQ8N0W4 816 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 NXPE1Q8N323 547 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 NANOGP1Q8N7R0 232 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 OR7D4Q8NG98 312 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SCGB1C1Q8TD33 95 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 HAVCR2Q8TDQ0 301 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 CHTF18Q8WVB6 975 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 APH1BQ8WW43 257 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SOCS4Q8WXH5 440 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FRZBQ92765 325 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 RSPRY1Q96DX4 576 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TOE1Q96GM8 510 aaKnown RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 CXorf58Q96LI9 332 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TRIB3Q96RU7 358 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ZIC5Q96T25 663 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 PITX2Q99697 317 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FDXACB1Q9BRP7 624 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 RNF208Q9H0X6 261 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 EQTNQ9NQ60 294 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 MMP26Q9NRE1 261 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 MED9Q9NWA0 146 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TAS2R16Q9NYV7 291 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 CDHR4A6H8M9 788 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 HMSDA8MTL9 139 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 UMAD1C9J7I0 102 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 M0R129 80 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 GPR39O43194 453 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 EIF3GO75821 320 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 LPLP06858 475 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 RHOP08100 348 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 C6P13671 934 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ELK1P19419 428 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 NME2P22392 152 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 AGTR2P50052 363 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 YBEYP58557 167 aaPredicted RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SNRPGP62308 76 aaKnown RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 RPL23AP62750 156 aaKnown RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 RPP30P78346 268 aaKnown RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 KCNJ10P78508 379 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SPOCK1Q08629 439 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 HSPB3Q12988 150 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 PLA2G7Q13093 441 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ZNF239Q16600 458 aaKnown RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SYPL2Q5VXT5 272 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ZDHHC20Q5W0Z9 365 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 NOXRED1Q6NXP6 359 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 PET117Q6UWS5 81 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 FAM151BQ6UXP7 276 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 FAM71CQ8NEG0 241 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 OR4K17Q8NGC6 315 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SYNPRQ8TBG9 265 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 PROKR1Q8TCW9 393 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 LINC01599Q8WXQ3 324 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 EXTL1Q92935 676 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 IMP4Q96G21 291 aaKnown RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ZNF354BQ96LW1 612 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 CCDC74BQ96LY2 380 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 DPH2Q9BQC3 489 aaPredicted RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 POLDIP3Q9BY77 421 aaKnown RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SPATC1LQ9H0A9 340 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 LMAN1LQ9HAT1 526 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 AGO1Q9UL18 857 aaKnown RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 NPFFR2Q9Y5X5 522 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ZNF780BQ9Y6R6 833 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 OR51F1A6NGY5 319 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ZNF736B4DX44 427 aaPredicted RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 USP2O75604 605 aaPredicted RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ATP1B1P05026 303 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SLURP2P0DP57 97 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SFTPCP11686 197 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 FABP4P15090 132 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ITGB5P18084 799 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 UQCRC2P22695 453 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SERPINA4P29622 427 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 TLX1P31314 330 aaPredicted RBP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SLC6A6P31641 620 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ARL2P36404 184 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ST8SIA6P61647 398 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 CLINT1Q14677 625 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ABRAXAS2Q15018 415 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ACSM3Q53FZ2 586 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 CARD16Q5EG05 197 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SAPCD1Q5SSQ6 148 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 TMEM71Q6P5X7 295 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 METTL7BQ6UX53 244 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ZNF679Q8IYX0 411 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 SPICQ8N5J4 248 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 BBS10Q8TAM1 723 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 TMEM68Q96MH6 324 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 TSGA13Q96PP4 275 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 CLCC1Q96S66 551 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 KLK14Q9P0G3 267 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 TRAV18A0A075B6X5 111 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 LOC390937A0A1W2PQ73 354 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 OR6C6A6NF89 314 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 ANKUB1A6NFN9 424 aa4.85□□□□□ -1.63
SCN11A-202ENST00000444237 A6NIN4 97 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms