RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 GALNT6Q8NCL4 622 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 GHSRQ92847 366 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 CNRIP1Q96F85 164 aaPredicted RBP10.87□□□□□ -0.67
HCFC1-203ENST00000444191 METTL2AQ96IZ6 378 aaKnown RBP10.87□□□□□ -0.67
HCFC1-203ENST00000444191 SIGLEC11Q96RL6 698 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 SGPP1Q9BX95 441 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 UBQLN3Q9H347 655 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 SYNPO2LQ9H987 977 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 SLC25A19Q9HC21 320 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 NPAP1Q9NZP6 1156 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 LRRN3E7EW58 273 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 NPC1O15118 1278 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 RNF13O43567 381 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 PIPP12273 146 aaPredicted RBP10.87□□□□□ -0.67
HCFC1-203ENST00000444191 PVRP15151 417 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 LCN1P31025 176 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 HMGA2P52926 109 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 CRMP1Q14194 572 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 ELAVL3Q14576 367 aaKnown RBP10.87□□□□□ -0.67
HCFC1-203ENST00000444191 OCLNQ16625 522 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 LHX8Q68G74 356 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 C12orf73Q69YU5 71 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 LCTLQ6UWM7 567 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 PLCZ1Q86YW0 608 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 ZNF527Q8NB42 609 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 OR4Q3Q8NH05 313 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 ZFAND1Q8TCF1 268 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 GIMAP1Q8WWP7 306 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 ACOT11Q8WXI4 607 aaPredicted RBP10.87□□□□□ -0.67
HCFC1-203ENST00000444191 DHRS9Q9BPW9 319 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 TMEM43Q9BTV4 400 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 LRRN3Q9H3W5 708 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 CALML5Q9NZT1 146 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 MGAT4CQ9UBM8 478 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 RCE1Q9Y256 329 aa10.87□□□□□ -0.67
HCFC1-203ENST00000444191 A0A0B4J293 547 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 E9PI62 339 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 H3BUI4 141 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 L7N2F9 121 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 GREM1O60565 184 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 SLC19A2O60779 497 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 OR7A10O76100 309 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 LGI1O95970 557 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 ZNF3P17036 446 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 OPRD1P41143 372 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 BCL6P41182 706 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 CSNK1G2P78368 415 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 SNTA1Q13424 505 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 DEFB110Q30KQ9 67 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 CNKSR3Q6P9H4 555 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 TMED4Q7Z7H5 227 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 ATF6BQ99941 703 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 ORAI3Q9BRQ5 295 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 TAPBPLQ9BX59 468 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 NXF2Q9GZY0 626 aaKnown RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 PCBD2Q9H0N5 130 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 SLC6A17Q9H1V8 727 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 CCDC86Q9H6F5 360 aaKnown RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 SRA1Q9HD15 236 aaKnown RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 SPHK1Q9NYA1 384 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 A0A0G2JPF8 293 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 HNRNPCL3B7ZW38 293 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 ARPC1BO15143 372 aaKnown RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 IFNGP01579 166 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 UCHL1P09936 223 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 ZNF888P0CJ79 500 aaPredicted RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 HNRNPCL4P0DMR1 293 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 TYRP1P17643 537 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 POU3F3P20264 500 aaPredicted RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 RAB28P51157 221 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 CDK3Q00526 305 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 SFXN4Q6P4A7 337 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 KIAA1324Q6UXG2 1013 aaKnown RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 ZNF793Q6ZN11 406 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 RTL4Q6ZR62 310 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 QSOX2Q6ZRP7 698 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 GDF7Q7Z4P5 450 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 RERGQ96A58 199 aaPredicted RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 ELMOD3Q96FG2 381 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 HSPA12BQ96MM6 686 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 FOLH1BQ9HBA9 442 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 MBNL1Q9NR56 388 aaKnown RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 FKBP14Q9NWM8 211 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 SESN1Q9Y6P5 492 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 SCN4AP35499 1836 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 TP53BP1Q12888 1972 aaPredicted RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 PRAMEF27A3QJZ7 478 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 DUXAA6NLW8 204 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 PEX12O00623 359 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 IFNA7P01567 189 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 APEHP13798 732 aaKnown RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 PRKACAP17612 351 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 GBX2P52951 348 aaPredicted RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 HSF2Q03933 536 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 PUS10Q3MIT2 529 aaKnown RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 CDONQ4KMG0 1287 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 ZNF322Q6U7Q0 402 aaPredicted RBP10.86□□□□□ -0.67
HCFC1-203ENST00000444191 HDDC2Q7Z4H3 204 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 UBE2Q1Q7Z7E8 422 aa10.86□□□□□ -0.67
HCFC1-203ENST00000444191 LINC00471Q8N535 108 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms