RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 GMPR2Q9P2T1 348 aaKnown RBP14.54□□□□□ -0.08
USP39-205ENST00000442708 SUCOQ9UBS9 1254 aaKnown RBP14.54□□□□□ -0.08
USP39-205ENST00000442708 DKKL1Q9UK85 242 aa14.54□□□□□ -0.08
USP39-205ENST00000442708 RPH3AQ9Y2J0 694 aaPredicted RBP14.54□□□□□ -0.08
USP39-205ENST00000442708 HIVEP3Q5T1R4 2406 aa14.54□□□□□ -0.08
USP39-205ENST00000442708 A0A0G2JPF8 293 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 HNRNPCL2B2RXH8 293 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 HNRNPCL3B7ZW38 293 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 NPIPA2E9PIF3 369 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 NPIPA3F8WFD2 350 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 H3BNH8 94 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 GTPBP1O00178 669 aaKnown RBP14.53□□□□□ -0.08
USP39-205ENST00000442708 NDUFAB1O14561 156 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 ZNF264O43296 627 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 SLC19A2O60779 497 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 HNRNPCL1O60812 293 aaKnown RBP14.53□□□□□ -0.08
USP39-205ENST00000442708 ADAM11O75078 769 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 GCM2O75603 506 aaPredicted RBP14.53□□□□□ -0.08
USP39-205ENST00000442708 CSTAP01040 98 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 HNRNPCL4P0DMR1 293 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 UBL4AP11441 157 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 HK1P19367 917 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 PTGS2P35354 604 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 NUDT2P50583 147 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 GFRA1P56159 465 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 KCNJ10P78508 379 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 SRSF1Q07955 248 aaKnown RBP eCLIP14.53□□□□□ -0.083e-6■■■■■ 29.6
USP39-205ENST00000442708 SCARB2Q14108 478 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 ELOAQ14241 798 aaKnown RBP14.53□□□□□ -0.08
USP39-205ENST00000442708 TOMM34Q15785 309 aaPredicted RBP14.53□□□□□ -0.08
USP39-205ENST00000442708 C3AR1Q16581 482 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 CYP51A1Q16850 503 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 REEP3Q6NUK4 255 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 SERPINA11Q86U17 422 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 LSRQ86X29 649 aaPredicted RBP14.53□□□□□ -0.08
USP39-205ENST00000442708 FAM71CQ8NEG0 241 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 OR5M1Q8NGP8 315 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 CNOT9Q92600 299 aaKnown RBP14.53□□□□□ -0.08
USP39-205ENST00000442708 PMM1Q92871 262 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 ZNF583Q96ND8 569 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 EXO5Q9H790 373 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 EFCAB1Q9HAE3 211 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 CALML5Q9NZT1 146 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 TINAGQ9UJW2 476 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 MRPS18CQ9Y3D5 142 aaKnown RBP14.53□□□□□ -0.08
USP39-205ENST00000442708 CHST2Q9Y4C5 530 aa14.53□□□□□ -0.08
USP39-205ENST00000442708 EIF4E2O60573 245 aaKnown RBP14.52□□□□□ -0.09
USP39-205ENST00000442708 STSP08842 583 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 UBTFL6P0CB48 400 aaPredicted RBP14.52□□□□□ -0.09
USP39-205ENST00000442708 NID1P14543 1247 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 BMP7P18075 431 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 MSX1P28360 303 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 P2RX1P51575 399 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 CRYZQ08257 329 aaKnown RBP14.52□□□□□ -0.09
USP39-205ENST00000442708 ZNF630Q2M218 657 aaPredicted RBP14.52□□□□□ -0.09
USP39-205ENST00000442708 TMEM44Q2T9K0 475 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 PLPPR5Q32ZL2 321 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 PRAMEF8Q5VWM4 474 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 C1QL3Q5VWW1 255 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 PRAMEF7Q5VXH5 474 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 HACD2Q6Y1H2 254 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 ZNF836Q6ZNA1 936 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 EIF3MQ7L2H7 374 aaKnown RBP14.52□□□□□ -0.09
USP39-205ENST00000442708 COMTD1Q86VU5 262 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 DOLPP1Q86YN1 238 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 SLC15A3Q8IY34 581 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 CLIP4Q8N3C7 705 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 OR5M9Q8NGP3 310 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 OR52P1PQ8NH57 321 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 BBS10Q8TAM1 723 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 FAM57AQ8TBR7 257 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 GPR119Q8TDV5 335 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 WDR60Q8WVS4 1066 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 OIT3Q8WWZ8 545 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 UGT2B28Q9BY64 529 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 LAT2Q9GZY6 243 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.52□□□□□ -0.09
USP39-205ENST00000442708 PNPLA3Q9NST1 481 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 MED17Q9NVC6 651 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 RLIMQ9NVW2 624 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 TAGLN3Q9UI15 199 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 VDAC3Q9Y277 283 aa14.52□□□□□ -0.09
USP39-205ENST00000442708 C15orf38-AP3S2A0A0A6YYH1 394 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 TMEM247A6NEH6 219 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 CCT8L1PA6NM43 557 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 C5orf58C9J3I9 102 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 NME4O00746 187 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 DNAJA2O60884 412 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 CYP7B1O75881 506 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 DBIP07108 87 aaKnown RBP14.51□□□□□ -0.09
USP39-205ENST00000442708 LINGO3P0C6S8 592 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 ABOP16442 354 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 IL7RP16871 459 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 AQP1P29972 269 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 STARP49675 285 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 PCBP3P57721 371 aaKnown RBP14.51□□□□□ -0.09
USP39-205ENST00000442708 EEF1A1P68104 462 aaKnown RBP14.51□□□□□ -0.09
USP39-205ENST00000442708 RBPJQ06330 500 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 GNA13Q14344 377 aa14.51□□□□□ -0.09
USP39-205ENST00000442708 GANABQ14697 944 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms