RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 DTNAQ9Y4J8 743 aa16.37■□□□□ 0.21
HDAC7-213ENST00000440293 PCDHB14Q9Y5E9 798 aa16.37■□□□□ 0.21
HDAC7-213ENST00000440293 NPIPA5A0A0B4J1W7 369 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 NPIPA7E9PJI5 369 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 GTPBP1O00178 669 aaKnown RBP16.36■□□□□ 0.21
HDAC7-213ENST00000440293 HMGN4O00479 90 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 DYNC1I1O14576 645 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 C1QCP02747 245 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 NPIPA8P0DM63 369 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 CHMP24386 653 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 GFRA1P56159 465 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 ENPP6Q6UWR7 440 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 ULK2Q8IYT8 1036 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 PNPT1Q8TCS8 783 aaKnown RBP16.36■□□□□ 0.21
HDAC7-213ENST00000440293 PHOSPHO1Q8TCT1 267 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 C1GALT1C1Q96EU7 318 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 SFXN2Q96NB2 322 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 PRDM14Q9GZV8 571 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 ZNF350Q9GZX5 532 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 PAIP1Q9H074 479 aaKnown RBP16.36■□□□□ 0.21
HDAC7-213ENST00000440293 ZNF385DQ9H6B1 395 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 MKLN1Q9UL63 735 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 SPG11Q96JI7 2443 aa16.36■□□□□ 0.21
HDAC7-213ENST00000440293 A0A096LPI6 279 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 A0A1W2PP18 115 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 FAM90A27PA6NNH2 459 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 LINC01387J3KSC0 135 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 CPN1P15169 458 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 CRATP43155 626 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 NUP107P57740 925 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 CD226Q15762 336 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 ZNF141Q15928 474 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 GTDC1Q4AE62 458 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 GPAT3Q53EU6 434 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 COX20Q5RI15 118 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 C1orf185Q5T7R7 199 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 CGB2Q6NT52 195 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 B3GNT6Q6ZMB0 384 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 TMEM200AQ86VY9 491 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 ZNF614Q8N883 585 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 B4GALNT2Q8NHY0 566 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 OIT3Q8WWZ8 545 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 WDYHV1Q96HA8 205 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 ZNF317Q96PQ6 595 aaPredicted RBP16.35■□□□□ 0.21
HDAC7-213ENST00000440293 TRNT1Q96Q11 434 aaKnown RBP16.35■□□□□ 0.21
HDAC7-213ENST00000440293 TTYH2Q9BSA4 534 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 SAP130Q9H0E3 1048 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 MRGBPQ9NV56 204 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 CAMK2AQ9UQM7 478 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 WDR45Q9Y484 360 aa16.35■□□□□ 0.21
HDAC7-213ENST00000440293 A0A087WZY1 265 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 HCRTR2O43614 444 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 GMFGO60234 142 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 TCEA1P23193 301 aaKnown RBP16.34■□□□□ 0.21
HDAC7-213ENST00000440293 STARP49675 285 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 MVDP53602 400 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 HPCAP84074 193 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 SF3A3Q12874 501 aaKnown RBP eCLIP16.34■□□□□ 0.21
HDAC7-213ENST00000440293 MYBPHQ13203 477 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 SLC25A35Q3KQZ1 300 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 PAGE3Q5JUK9 113 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.34■□□□□ 0.21
HDAC7-213ENST00000440293 LRIF1Q5T3J3 769 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 RTL6Q6ICC9 239 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 TYW3Q6IPR3 259 aaKnown RBP16.34■□□□□ 0.21
HDAC7-213ENST00000440293 OLIG3Q7RTU3 272 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 CCDC71Q8IV32 467 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-213ENST00000440293 TSPEARQ8WU66 669 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 SH3YL1Q96HL8 342 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-213ENST00000440293 PIGQQ9BRB3 760 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 RAD21L1Q9H4I0 556 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 THUMPD1Q9NXG2 353 aaKnown RBP16.34■□□□□ 0.21
HDAC7-213ENST00000440293 KLHL14Q9P2G3 628 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 LEF1Q9UJU2 399 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-213ENST00000440293 FAM215AQ9Y5M1 114 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 ITPR3Q14573 2671 aa16.34■□□□□ 0.21
HDAC7-213ENST00000440293 NCKAP5O14513 1909 aa16.33■□□□□ 0.21
HDAC7-213ENST00000440293 HCFC1P51610 2035 aa16.33■□□□□ 0.21
HDAC7-213ENST00000440293 PRAMEF27A3QJZ7 478 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 SERINC4A6NH21 518 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 CLIC1O00299 241 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 EIF4E2O60573 245 aaKnown RBP16.33■□□□□ 0.2
HDAC7-213ENST00000440293 UGT2B17O75795 530 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 H6PDO95479 791 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 EPPINO95925 133 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 GLI4P10075 376 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 NR2F1P10589 423 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 PEPDP12955 493 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 IST1P53990 364 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 B3GALT5-AS1P59052 145 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 CHRNEQ04844 493 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 FUT5Q11128 374 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 BCL2A1Q16548 175 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 SYPL1Q16563 259 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 DCST1Q5T197 706 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 PDZK1Q5T2W1 519 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 RAET1LQ5VY80 246 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 ARSKQ6UWY0 536 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 LRRC74BQ6ZQY2 392 aa16.33■□□□□ 0.2
HDAC7-213ENST00000440293 TGIF2LYQ8IUE0 185 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms