RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 CD40P25942 277 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 MPIP34949 423 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 PDLIM4P50479 330 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 ZNF83P51522 516 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 SLC18A2Q05940 514 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 TECRLQ5HYJ1 363 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 ZNF544Q6NX49 715 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 TMEM107Q6UX40 140 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 TMEM108Q6UXF1 575 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 RPS27LQ71UM5 84 aaKnown RBP11.95□□□□□ -0.5
SMC2-204ENST00000440179 SSX8Q7RTT4 187 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 P2RY8Q86VZ1 359 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 KLHL7Q8IXQ5 586 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 PPM1NQ8N819 430 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 OR4C3Q8NH37 302 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 ACTRT2Q8TDY3 377 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 SELENOMQ8WWX9 145 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 PHF21BQ96EK2 531 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 REXO5Q96IC2 774 aaKnown RBP11.95□□□□□ -0.5
SMC2-204ENST00000440179 FOXN4Q96NZ1 517 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 LMF2Q9BU23 707 aaKnown RBP11.95□□□□□ -0.5
SMC2-204ENST00000440179 BCO1Q9HAY6 547 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 GIMAP4Q9NUV9 329 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 SNX12Q9UMY4 172 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 NOTCH1P46531 2555 aa11.95□□□□□ -0.5
SMC2-204ENST00000440179 HMX2A2RU54 273 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 OXSR1O95747 527 aaPredicted RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 JUNP05412 331 aaKnown RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 NGFRP08138 427 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 LINGO3P0C6S8 592 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 ZNF23P17027 643 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 PTAFRP25105 342 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 GABRA3P34903 492 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 ZNF41P51814 821 aaPredicted RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 PSMD4P55036 377 aaKnown RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 FOXF1Q12946 379 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 PDLIM3Q53GG5 364 aaPredicted RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 TCHHL1Q5QJ38 904 aaPredicted RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 C3orf62Q6ZUJ4 267 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 ZAR1Q86SH2 424 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 OR2L13Q8N349 312 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 ZNF433Q8N7K0 673 aaPredicted RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 CDYL2Q8N8U2 506 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 FAM110BQ8TC76 370 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 SH3YL1Q96HL8 342 aaPredicted RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 PSD2Q9BQI7 771 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 PIMREGQ9BSJ6 248 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 VPS29Q9UBQ0 182 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 DMGDHQ9UI17 866 aaKnown RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 ZNF225Q9UK10 706 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 MRTO4Q9UKD2 239 aaKnown RBP11.94□□□□□ -0.5
SMC2-204ENST00000440179 SLC25A15Q9Y619 301 aa11.94□□□□□ -0.5
SMC2-204ENST00000440179 IGHV3-15A0A0B4J1V0 119 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 PCDH7O60245 1069 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 KLHL2O95198 593 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 ELK4P28324 431 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 SRP14P37108 136 aaKnown RBP11.93□□□□□ -0.5
SMC2-204ENST00000440179 PRIM2P49643 509 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 CCDC91Q7Z6B0 441 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 GAS2L3Q86XJ1 694 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 SLC35F6Q8N357 371 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 OR52N5Q8NH56 324 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 C16orf78Q8WTQ4 265 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 ZFAND2BQ8WV99 257 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 PIK3R3Q92569 461 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 ZNF75CPQ92670 426 aaPredicted RBP11.93□□□□□ -0.5
SMC2-204ENST00000440179 SORCS2Q96PQ0 1159 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 BBS4Q96RK4 519 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 INPP5KQ9BT40 448 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 TIGARQ9NQ88 270 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 DDX18Q9NVP1 670 aaKnown RBP11.93□□□□□ -0.5
SMC2-204ENST00000440179 SNX24Q9Y343 169 aa11.93□□□□□ -0.5
SMC2-204ENST00000440179 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMC2-204ENST00000440179 GNG14A0A1W2PPG7 69 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 A0A1W2PR80 420 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 C9JVG2 144 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 STX16-NPEPL1H3BU86 382 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 STX16O14662 325 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 RGS14O43566 566 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 RPS17P08708 135 aaKnown RBP11.92□□□□□ -0.5
SMC2-204ENST00000440179 TSPAN8P19075 237 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 IL2RGP31785 369 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 MAP3K8P41279 467 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 NCBP2P52298 156 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMC2-204ENST00000440179 CHRNB3Q05901 458 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 SLC29A2Q14542 456 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 HEPACAMQ14CZ8 416 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 ZNHIT3Q15649 155 aaPredicted RBP11.92□□□□□ -0.5
SMC2-204ENST00000440179 CD226Q15762 336 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 SWI5Q1ZZU3 235 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 GLE1Q53GS7 698 aaKnown RBP11.92□□□□□ -0.5
SMC2-204ENST00000440179 MROH9Q5TGP6 573 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 PLD6Q8N2A8 252 aaKnown RBP11.92□□□□□ -0.5
SMC2-204ENST00000440179 SLC43A2Q8N370 569 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 C3orf56Q8N813 242 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 ZNF775Q96BV0 537 aaPredicted RBP11.92□□□□□ -0.5
SMC2-204ENST00000440179 ELP4Q96EB1 424 aa11.92□□□□□ -0.5
SMC2-204ENST00000440179 ZNF300Q96RE9 604 aaPredicted RBP11.92□□□□□ -0.5
SMC2-204ENST00000440179 BHLHE41Q9C0J9 482 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms