RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 FLRT3Q9NZU0 649 aa18.09■□□□□ 0.49
APTR-204ENST00000440088 CFAP54Q96N23 3096 aa18.09■□□□□ 0.49
APTR-204ENST00000440088 DLGAP3O95886 979 aa18.08■□□□□ 0.49
APTR-204ENST00000440088 LSM11P83369 360 aaKnown RBP eCLIP18.08■□□□□ 0.49
APTR-204ENST00000440088 CD47Q08722 323 aa18.08■□□□□ 0.49
APTR-204ENST00000440088 KCTD21Q4G0X4 260 aa18.08■□□□□ 0.49
APTR-204ENST00000440088 CD300LDQ6UXZ3 194 aa18.08■□□□□ 0.49
APTR-204ENST00000440088 ZNF440Q8IYI8 595 aa18.08■□□□□ 0.49
APTR-204ENST00000440088 OR5L2Q8NGL0 311 aa18.08■□□□□ 0.49
APTR-204ENST00000440088 WDR36Q8NI36 951 aaKnown RBP18.08■□□□□ 0.49
APTR-204ENST00000440088 TRIM2Q9C040 744 aa18.08■□□□□ 0.49
APTR-204ENST00000440088 LIN28AQ9H9Z2 209 aaKnown RBP18.08■□□□□ 0.49
APTR-204ENST00000440088 C9orf172C9J069 976 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 ICOSLGO75144 302 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 OSMP13725 252 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 ELK4P28324 431 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 FOLR3P41439 243 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 FNDC7Q5VTL7 733 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 APLFQ8IW19 511 aaPredicted RBP18.08■□□□□ 0.48
APTR-204ENST00000440088 LSMEM1Q8N8F7 131 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 DEFB124Q8NES8 71 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 TMEM255BQ8WV15 326 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 PCDHGA6Q9Y5G7 932 aa18.08■□□□□ 0.48
APTR-204ENST00000440088 A0A1W2PNU3 283 aaPredicted RBP18.07■□□□□ 0.48
APTR-204ENST00000440088 ADAM11O75078 769 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 GGT2P36268 569 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 CRISP1P54107 249 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 PCOLCEQ15113 449 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 MEP1AQ16819 746 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 C3orf38Q5JPI3 329 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 FAM71CQ8NEG0 241 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 TSPAN14Q8NG11 270 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 PIGXQ8TBF5 258 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 PHOSPHO1Q8TCT1 267 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 THAP3Q8WTV1 239 aaPredicted RBP18.07■□□□□ 0.48
APTR-204ENST00000440088 SPRY4Q9C004 299 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 POLR1BQ9H9Y6 1135 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 REV1Q9UBZ9 1251 aa18.07■□□□□ 0.48
APTR-204ENST00000440088 SMIM18P0DKX4 95 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 UBL4AP11441 157 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 GSTM3P21266 225 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 CHMP24386 653 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 NUP107P57740 925 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 PTGES3Q15185 160 aaKnown RBP18.06■□□□□ 0.48
APTR-204ENST00000440088 CD226Q15762 336 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 CTU2Q2VPK5 515 aaKnown RBP18.06■□□□□ 0.48
APTR-204ENST00000440088 Q6ZPB1 254 aaPredicted RBP18.06■□□□□ 0.48
APTR-204ENST00000440088 MBOAT2Q6ZWT7 520 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 TIPARPQ7Z3E1 657 aaKnown RBP18.06■□□□□ 0.48
APTR-204ENST00000440088 RNF217Q8TC41 542 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 FBLIM1Q8WUP2 373 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 HDAC2Q92769 488 aaKnown RBP18.06■□□□□ 0.48
APTR-204ENST00000440088 ARSGQ96EG1 525 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 PRSS27Q9BQR3 290 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 MRPS26Q9BYN8 205 aaKnown RBP18.06■□□□□ 0.48
APTR-204ENST00000440088 ADNPQ9H2P0 1102 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 KRCC1Q9NPI7 259 aaPredicted RBP18.06■□□□□ 0.48
APTR-204ENST00000440088 NPFFR2Q9Y5X5 522 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 MUC6Q6W4X9 2439 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 IGHV1-45A0A0A0MS14 117 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 A0A0B4J2E0 115 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 A0A1B0GX12 115 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 OR6C70A6NIJ9 312 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 ZFAND5O76080 213 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 NGFRP08138 427 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 TCN2P20062 427 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 GSSP48637 474 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 NDUFAF6Q330K2 333 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 C6orf141Q5SZD1 244 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 APOOLQ6UXV4 268 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 CCDC71Q8IV32 467 aaPredicted RBP18.06■□□□□ 0.48
APTR-204ENST00000440088 GATSQ8NAP1 163 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 GNPDA2Q8TDQ7 276 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 HS3ST3B1Q9Y662 390 aa18.06■□□□□ 0.48
APTR-204ENST00000440088 A0A1B0GWA3 101 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 GTPBP1O00178 669 aaKnown RBP18.05■□□□□ 0.48
APTR-204ENST00000440088 CHP2O43745 196 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 NTN1O95631 604 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 CLPTM1O96005 669 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 IGHEP01854 428 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 RAB40ALP0C0E4 278 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 POU1F1P28069 291 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 BTBD16Q32M84 506 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 RBM48Q5RL73 367 aaKnown RBP18.05■□□□□ 0.48
APTR-204ENST00000440088 DESI1Q6ICB0 168 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 PRICKLE2Q7Z3G6 844 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 NRMQ8IXM6 262 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 RNF113BQ8IZP6 322 aaKnown RBP18.05■□□□□ 0.48
APTR-204ENST00000440088 FAM81AQ8TBF8 368 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 GRHL3Q8TE85 626 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 ZNF700Q9H0M5 742 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 ZBTB20Q9HC78 741 aaPredicted RBP18.05■□□□□ 0.48
APTR-204ENST00000440088 EXOSC3Q9NQT5 275 aaKnown RBP18.05■□□□□ 0.48
APTR-204ENST00000440088 RPS6KB2Q9UBS0 482 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.05■□□□□ 0.48
APTR-204ENST00000440088 A0A1W2PQD3 144 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 TRIM64A6NGJ6 449 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 TMEM200CA6NKL6 621 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 ZAR1LA6NP61 321 aa18.05■□□□□ 0.48
APTR-204ENST00000440088 ALG1L2C9J202 215 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms