RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 INTS12Q96CB8 462 aaKnown RBP21.67■■□□□ 1.06
CPNE1-217ENST00000439669 LRRC46Q96FV0 321 aa21.67■■□□□ 1.06
CPNE1-217ENST00000439669 RNF145Q96MT1 663 aa21.67■■□□□ 1.06
CPNE1-217ENST00000439669 ZFP3Q96NJ6 502 aa21.67■■□□□ 1.06
CPNE1-217ENST00000439669 TREX2Q9BQ50 279 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-217ENST00000439669 KLHDC3Q9BQ90 382 aa21.67■■□□□ 1.06
CPNE1-217ENST00000439669 NMUR2Q9GZQ4 415 aa21.67■■□□□ 1.06
CPNE1-217ENST00000439669 ZNF350Q9GZX5 532 aa21.67■■□□□ 1.06
CPNE1-217ENST00000439669 TCF7L2Q9NQB0 619 aa21.67■■□□□ 1.06
CPNE1-217ENST00000439669 STOML1Q9UBI4 398 aa21.67■■□□□ 1.06
CPNE1-217ENST00000439669 MKLN1Q9UL63 735 aa21.67■■□□□ 1.06
CPNE1-217ENST00000439669 SLC22A20A6NK97 555 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 EEF1E1-BLOC1S5C9J1V9 151 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 RFXANKO14593 260 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 EEF1E1O43324 174 aaKnown RBP21.66■■□□□ 1.06
CPNE1-217ENST00000439669 OIP5O43482 229 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 RCBTB2O95199 551 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 TGDSO95455 350 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 SSTR2P30874 369 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 CLDN15P56746 228 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 STX1BP61266 288 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 FOXF2Q12947 444 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 HEPHL1Q6MZM0 1159 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 POMZP3Q6PJE2 187 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 DMRTC2Q8IXT2 367 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-217ENST00000439669 GTPBP8Q8N3Z3 284 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-217ENST00000439669 TMCO5AQ8N6Q1 288 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 OR9I1Q8NGQ6 314 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 RFWD2Q8NHY2 731 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 NPAS1Q99742 590 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 PINK1Q9BXM7 581 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 ACBD3Q9H3P7 528 aa21.66■■□□□ 1.06
CPNE1-217ENST00000439669 C7orf72A4D263 438 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 FCMRO60667 390 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 TGM6O95932 706 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 IL18BPO95998 194 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 C1QCP02747 245 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 UBL4AP11441 157 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 IDH3AP50213 366 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 P2RX1P51575 399 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 CCR4P51679 360 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 SUMO3P55854 103 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-217ENST00000439669 RPS3AP61247 264 aaKnown RBP21.65■■□□□ 1.06
CPNE1-217ENST00000439669 HPCAP84074 193 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 TIGD2Q4W5G0 525 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 CBLN3Q6UW01 205 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 ROPN1LQ96C74 230 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 SFXN3Q9BWM7 321 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 RMND5AQ9H871 391 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 WDR45Q9Y484 360 aa21.65■■□□□ 1.06
CPNE1-217ENST00000439669 CRYBG3Q68DQ2 2970 aa21.64■■□□□ 1.06
CPNE1-217ENST00000439669 SERINC4A6NH21 518 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 EIF1AYO14602 144 aaKnown RBP21.64■■□□□ 1.05
CPNE1-217ENST00000439669 ANP32DO95626 131 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 ANXA11P50995 505 aaKnown RBP21.64■■□□□ 1.05
CPNE1-217ENST00000439669 POLR2JP52435 117 aaKnown RBP21.64■■□□□ 1.05
CPNE1-217ENST00000439669 AQP5P55064 265 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 DLX5P56178 289 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 FOXF1Q12946 379 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 ZNF141Q15928 474 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 SGCBQ16585 318 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 GPAT3Q53EU6 434 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 PNPT1Q8TCS8 783 aaKnown RBP21.64■■□□□ 1.05
CPNE1-217ENST00000439669 CKAP2Q8WWK9 683 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 FIG4Q92562 907 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 RNASE6Q93091 150 aaKnown RBP21.64■■□□□ 1.05
CPNE1-217ENST00000439669 C14orf79Q96F83 325 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 ZNF845Q96IR2 970 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-217ENST00000439669 EBF4Q9BQW3 602 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 TMEM185BQ9H7F4 350 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 POLE3Q9NRF9 147 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 ICAM5Q9UMF0 924 aa21.64■■□□□ 1.05
CPNE1-217ENST00000439669 CENPEQ02224 2701 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 CENPVL1A0A0U1RR11 272 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 ZNF264O43296 627 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 KIAA0513O60268 411 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 UGT2B17O75795 530 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 CYP7B1O75881 506 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 LINGO3P0C6S8 592 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 ME2P23368 584 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 EIF1AXP47813 144 aaKnown RBP21.63■■□□□ 1.05
CPNE1-217ENST00000439669 TLE4Q04727 773 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 FUT5Q11128 374 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 MYBPHQ13203 477 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 SNTB1Q13884 538 aaKnown RBP21.63■■□□□ 1.05
CPNE1-217ENST00000439669 PPP4R4Q6NUP7 873 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 GGNQ86UU5 652 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 METTL25Q8N6Q8 603 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 POC1BQ8TC44 478 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 ITCHQ96J02 903 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 MAGEB18Q96M61 343 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 CCDC28BQ9BUN5 200 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 KCNE5Q9UJ90 142 aa21.63■■□□□ 1.05
CPNE1-217ENST00000439669 CELSR2Q9HCU4 2923 aa21.62■■□□□ 1.05
CPNE1-217ENST00000439669 FAM234BA2RU67 622 aa21.62■■□□□ 1.05
CPNE1-217ENST00000439669 SYT5O00445 386 aa21.62■■□□□ 1.05
CPNE1-217ENST00000439669 HMGN4O00479 90 aa21.62■■□□□ 1.05
CPNE1-217ENST00000439669 KRT75O95678 551 aa21.62■■□□□ 1.05
CPNE1-217ENST00000439669 OPN1LWP04000 364 aa21.62■■□□□ 1.05
CPNE1-217ENST00000439669 PSMA4P25789 261 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms