RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ZNF136P52737 540 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 AQP5P55064 265 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 CASP9P55211 416 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 RPS26P62854 115 aaKnown RBP9.45□□□□□ -0.9
MCF2L-216ENST00000439475 CBFBQ13951 182 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 GNA13Q14344 377 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 FGFBP1Q14512 234 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF141Q15928 474 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 C6orf10Q5SRN2 563 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 GTF2IRD2BQ6EKJ0 949 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 HEPHL1Q6MZM0 1159 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 ARSKQ6UWY0 536 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 EIF3MQ7L2H7 374 aaKnown RBP9.45□□□□□ -0.9
MCF2L-216ENST00000439475 MAVSQ7Z434 540 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 ADGRE4PQ86SQ3 457 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 GTF2IRD2Q86UP8 949 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 RNF130Q86XS8 419 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 KIF18BQ86Y91 864 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 DMRTC2Q8IXT2 367 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF619Q8N2I2 560 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 GTPBP8Q8N3Z3 284 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-216ENST00000439475 C9orf106Q8NAJ2 232 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 OR5M1Q8NGP8 315 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 RFWD2Q8NHY2 731 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 TMEM234Q8WY98 164 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 PMM1Q92871 262 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 RAB8BQ92930 207 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 RNASE6Q93091 150 aaKnown RBP9.45□□□□□ -0.9
MCF2L-216ENST00000439475 SFXN3Q9BWM7 321 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF350Q9GZX5 532 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 LAT2Q9GZY6 243 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 PIGMQ9H3S5 423 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 RAD21L1Q9H4I0 556 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 RABEP2Q9H5N1 569 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 TMEM45AQ9NWC5 275 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 THUMPD1Q9NXG2 353 aaKnown RBP9.45□□□□□ -0.9
MCF2L-216ENST00000439475 CALML5Q9NZT1 146 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 MKLN1Q9UL63 735 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 SLC35A3Q9Y2D2 325 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 CARD8Q9Y2G2 431 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 GPC6Q9Y625 555 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-216ENST00000439475 LRRK2Q5S007 2527 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 MED12Q93074 2177 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 USP9YO00507 2555 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 FLNBO75369 2602 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 B4DXG7 233 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 C9JVG2 144 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 NPIPB9F8W1W9 429 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 EIF1AYO14602 144 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 FCMRO60667 390 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 CYP7B1O75881 506 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 SYNGR4O95473 234 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 CSTAP01040 98 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 NR2F1P10589 423 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 FCGR2AP12318 317 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 PGCP20142 388 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 EIF1AXP47813 144 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 MRPL19P49406 292 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 CLDN15P56746 228 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF117Q03924 483 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 TFF3Q07654 80 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 CD226Q15762 336 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 TMEM44Q2T9K0 475 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 PLPPR5Q32ZL2 321 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 PDZK1Q5T2W1 519 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 LRRC74BQ6ZQY2 392 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 ESPNLQ6ZVH7 1005 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 TMCO5AQ8N6Q1 288 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 METTL25Q8N6Q8 603 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 NAXEQ8NCW5 288 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 OR5W2Q8NH69 310 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 INTS12Q96CB8 462 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 ARSGQ96EG1 525 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 REXO5Q96IC2 774 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 MARK4Q96L34 752 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF559Q9BR84 538 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 SIKE1Q9BRV8 207 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 INPP5KQ9BT40 448 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 PINK1Q9BXM7 581 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 SAP130Q9H0E3 1048 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 SERHL2Q9H4I8 314 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 MTHFD2LQ9H903 347 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 CACYBPQ9HB71 228 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 TIGARQ9NQ88 270 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 SERINC1Q9NRX5 453 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 CLCF1Q9UBD9 225 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 KCNN3Q9UGI6 736 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 MCTS1Q9ULC4 181 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 TRIM33Q9UPN9 1127 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF175Q9Y473 711 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 DOCK7Q96N67 2140 aa9.44□□□□□ -0.9
MCF2L-216ENST00000439475 INTS1Q8N201 2190 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 SPTAN1Q13813 2472 aaKnown RBP9.44□□□□□ -0.9
MCF2L-216ENST00000439475 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 EEF1E1-BLOC1S5C9J1V9 151 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 EEF1E1O43324 174 aaKnown RBP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 UGT2B17O75795 530 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 SASH3O75995 380 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 LINGO3P0C6S8 592 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 PABPC4LP0CB38 370 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms