RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 MSRB3Q8IXL7 192 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 PGAM4Q8N0Y7 254 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 CLEC4FQ8N1N0 589 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 FAM83FQ8NEG4 500 aaPredicted RBP8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 OR52R1Q8NGF1 315 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 OR14L1PQ8NHC6 308 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 LINC01560Q8TB33 94 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 NINJ1Q92982 152 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 OMA1Q96E52 524 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 WDYHV1Q96HA8 205 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 TMEM41AQ96HV5 264 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 LCORQ96JN0 433 aaPredicted RBP8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 CDRT15Q96T59 188 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 CGREF1Q99674 301 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 HOPXQ9BPY8 73 aaPredicted RBP8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 ITPAQ9BY32 194 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 PRDM14Q9GZV8 571 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 LRMDAQ9H2I8 198 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 SLC6A13Q9NSD5 602 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 TAS2R9Q9NYW1 312 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 SLC25A37Q9NYZ2 338 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 FOXD3Q9UJU5 478 aaPredicted RBP8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 CBLCQ9ULV8 474 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 SNX8Q9Y5X2 465 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 DOCK7Q96N67 2140 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 JMJD1CQ15652 2540 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 ARID1AO14497 2285 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 ROS1P08922 2347 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 TRBV5-3A0A0A0MS03 114 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 PRAMEF25A6NGN4 478 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 CD8B2A6NJW9 211 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 H0Y3Z8 333 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 ACOX3O15254 700 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 GSC2O15499 205 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 ICOSLGO75144 302 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 REM1O75628 298 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 DNAJC8O75937 253 aaPredicted RBP8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 ZCCHC18P0CG32 403 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 TMIGD3P0DMS9 266 aaPredicted RBP8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 HOXB9P17482 250 aaPredicted RBP8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 KLK2P20151 261 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 TCEA1P23193 301 aaKnown RBP8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 SLC6A2P23975 617 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 OPRM1P35372 400 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 SOAT1P35610 550 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 PGM1P36871 562 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 MGAT2Q10469 447 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 MLC1Q15049 377 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 LTB4RQ15722 352 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 PRICKLE4Q2TBC4 344 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 FBXL19-AS1Q494R0 122 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 SPDYE7PQ495Y7 208 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 RUNDC3AQ59EK9 446 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 RABL3Q5HYI8 236 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 NHSL2Q5HYW2 709 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 NANOGP8Q6NSW7 305 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 TRIML2Q8N7C3 387 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 C9orf106Q8NAJ2 232 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 SIMC1Q8NDZ2 872 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 C17orf47Q8NEP4 570 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 OR9A2Q8NGT5 310 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 OR5AK3PQ8NH89 298 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 KAT2AQ92830 837 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 HGDQ93099 445 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 MCUR1Q96AQ8 359 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 AURKBQ96GD4 344 aaPredicted RBP8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 ANKRD27Q96NW4 1050 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 NODALQ96S42 347 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 SLC35A5Q9BS91 424 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 YIPF4Q9BSR8 244 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 THTPAQ9BU02 230 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 THUMPD3Q9BV44 507 aaKnown RBP8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 OSBPL11Q9BXB4 747 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 CADM1Q9BY67 442 aaKnown RBP8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 CXorf36Q9H7Y0 433 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 NANOGQ9H9S0 305 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 CALHM2Q9HA72 323 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 GALNT9Q9HCQ5 603 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 SIRT3Q9NTG7 399 aaPredicted RBP8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 ADA2Q9NZK5 511 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 MAT2BQ9NZL9 334 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 VAPAQ9P0L0 249 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 PRODH2Q9UF12 536 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 KIAA1549Q9HCM3 1950 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 TLN2Q9Y4G6 2542 aa8.35□□□□□ -1.07
AC011228.1-201ENST00000439027 CLIC1O00299 241 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 UGT2B11O75310 529 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 CBR3O75828 277 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 CBX7O95931 251 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 ACTL6AO96019 429 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 C1QCP02747 245 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 ATP1B1P05026 303 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 EPXP11678 715 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 DRD5P21918 477 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 UQCRC2P22695 453 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 KRT20P35900 424 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 CHI3L1P36222 383 aaPredicted RBP8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 PPICP45877 212 aa8.34□□□□□ -1.07
AC011228.1-201ENST00000439027 CCT3P49368 545 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms