RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 HOXC5Q00444 222 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 SPIBQ01892 262 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 SKP2Q13309 424 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 SNTA1Q13424 505 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 GANABQ14697 944 aaKnown RBP21.05■□□□□ 0.96
CPSF4-204ENST00000436336 NDUFAF6Q330K2 333 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 ENTPD8Q5MY95 495 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 ZNF468Q5VIY5 522 aaPredicted RBP21.05■□□□□ 0.96
CPSF4-204ENST00000436336 PAQR8Q8TEZ7 354 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 CARD8Q9Y2G2 431 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 CAPNS1P04632 268 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 IFNA8P32881 189 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 CASP3P42574 277 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 ACAA2P42765 397 aaKnown RBP21.04■□□□□ 0.96
CPSF4-204ENST00000436336 PTDSS1P48651 473 aaKnown RBP21.04■□□□□ 0.96
CPSF4-204ENST00000436336 CYB561P49447 251 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 GAS1P54826 345 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 C17orf67Q0P5P2 114 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 PIN1Q13526 163 aaPredicted RBP21.04■□□□□ 0.96
CPSF4-204ENST00000436336 RTL4Q6ZR62 310 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 NRG4Q8WWG1 115 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 ZNF559Q9BR84 538 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 PRR14Q9BWN1 585 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 SH2D2AQ9NP31 389 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 VNN3Q9NY84 501 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 SAMHD1Q9Y3Z3 626 aaKnown RBP21.04■□□□□ 0.96
CPSF4-204ENST00000436336 PCNX3Q9H6A9 2034 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 E2F6O75461 281 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 PTGDSP41222 190 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 TAS2R41P59536 307 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 ZNF117Q03924 483 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 EPS8Q12929 822 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 GK3PQ14409 553 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 DEFB109BQ30KR1 87 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 OGFRL1Q5TC84 451 aaPredicted RBP21.04■□□□□ 0.96
CPSF4-204ENST00000436336 AGAP7PQ5VUJ5 663 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 SLC22A10Q63ZE4 541 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 LPCAT4Q643R3 524 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 CBLN3Q6UW01 205 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 PLEKHM3Q6ZWE6 761 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 SPACA3Q8IXA5 215 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 OFCC1Q8IZS5 231 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 CYP4Z2PQ8N1L4 340 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 PIK3C3Q8NEB9 887 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 EME1Q96AY2 570 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 DHRS1Q96LJ7 313 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 AGAP4Q96P64 663 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 EPYCQ99645 322 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 FNDC11Q9BVV2 318 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 OSBPL11Q9BXB4 747 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 HHATLQ9HCP6 504 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 SDHAF3Q9NRP4 125 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 GPR83Q9NYM4 423 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 CNIH4Q9P003 139 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 LYVE1Q9Y5Y7 322 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 U3KQV3 271 aa21.04■□□□□ 0.96
CPSF4-204ENST00000436336 ASPMQ8IZT6 3477 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 CPSF4LA6NMK7 179 aaKnown RBP21.03■□□□□ 0.96
CPSF4-204ENST00000436336 RRP8O43159 456 aaKnown RBP21.03■□□□□ 0.96
CPSF4-204ENST00000436336 OIP5O43482 229 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 ADAM11O75078 769 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 GADD45GO95257 159 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 ZNF23P17027 643 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 HTR2AP28223 471 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 PEX2P28328 305 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 DNAJA1P31689 397 aaKnown RBP21.03■□□□□ 0.96
CPSF4-204ENST00000436336 CASRP41180 1078 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 CDH12P55289 794 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 SMIM11AP58511 58 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 COLEC12Q5KU26 742 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 SLC30A6Q6NXT4 461 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 CCDC81Q6ZN84 652 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 TSPYL5Q86VY4 417 aaPredicted RBP21.03■□□□□ 0.96
CPSF4-204ENST00000436336 APLFQ8IW19 511 aaPredicted RBP21.03■□□□□ 0.96
CPSF4-204ENST00000436336 SVOPLQ8N434 492 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 TMCO5AQ8N6Q1 288 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 OR5K1Q8NHB7 308 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 ADAMTS16Q8TE57 1224 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 NMNAT1Q9HAN9 279 aaPredicted RBP21.03■□□□□ 0.96
CPSF4-204ENST00000436336 ACER3Q9NUN7 267 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 RHCGQ9UBD6 479 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 CNOT11Q9UKZ1 510 aaKnown RBP21.03■□□□□ 0.96
CPSF4-204ENST00000436336 OAZ3Q9UMX2 235 aa21.03■□□□□ 0.96
CPSF4-204ENST00000436336 SAC3D1A6NKF1 404 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 A6NL46 340 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 TNFRSF11BO00300 401 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 HCRTR2O43614 444 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 OR5F1O95221 314 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 H1F0P07305 194 aaKnown RBP21.02■□□□□ 0.96
CPSF4-204ENST00000436336 FPR1P21462 350 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 HOXD11P31277 338 aaPredicted RBP21.02■□□□□ 0.96
CPSF4-204ENST00000436336 SLC6A8P48029 635 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 ARHGDIAP52565 204 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 HMGA2P52926 109 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 IST1P53990 364 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 PPP1R8Q12972 351 aaKnown RBP21.02■□□□□ 0.96
CPSF4-204ENST00000436336 OR1Q1Q15612 314 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 BICRALQ6AI39 1079 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 ISLR2Q6UXK2 745 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 LSMEM1Q8N8F7 131 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms