RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PDCD11Q14690 1871 aaKnown RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 A8MVJ9 347 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ANHXE9PGG2 379 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 TNFRSF10BO14763 440 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 MAGEB4O15481 346 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 RNF13O43567 381 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CREBL2O60519 120 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CLTBP09497 229 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 SMIM10L2AP0DMW4 78 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 SMIM10L2BP0DMW5 78 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ADH7P40394 386 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 BUD31P41223 144 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CTSOP43234 321 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 TPGS1Q6ZTW0 290 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 MS4A4EQ96PG1 132 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 YIPF4Q9BSR8 244 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 PDFQ9HBH1 243 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 LCTP09848 1927 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 SULT1C2O00338 296 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ARAFP10398 606 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF8P17098 575 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CAPZA1P52907 286 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CEBPGP53567 150 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CLDN12P56749 244 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 HSPB3Q12988 150 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 HYAL4Q2M3T9 481 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 METTL11BQ5VVY1 283 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 SAMD14Q8IZD0 417 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 OR14A16Q8NHC5 309 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 PPTC7Q8NI37 304 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 PHOSPHO1Q8TCT1 267 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 GNPDA2Q8TDQ7 276 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ECHDC3Q96DC8 303 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM185BQ9H7F4 350 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 PLEKHM1Q9Y4G2 1056 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ALPK3Q96L96 1907 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CPSF4LA6NMK7 179 aaKnown RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 K7ERQ8 282 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CHST10O43529 356 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ITGB8P26012 769 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CCR9P51686 369 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 PRKAG1P54619 331 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 RAP2BP61225 183 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 TAF10Q12962 218 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 OR52I2Q8NH67 350 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 INTS12Q96CB8 462 aaKnown RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 BBS4Q96RK4 519 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 S100A13Q99584 98 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 HRASLSQ9HDD0 168 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ARL5CA6NH57 179 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 PRAMEF2O60811 474 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CDC123O75794 336 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 RPN2P04844 631 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ACP5P13686 325 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 THBS2P35442 1172 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ASMTP46597 345 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 XKR4Q5GH76 650 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 SEZ6L2Q6UXD5 910 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 EXOSC3Q9NQT5 275 aaKnown RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 J3QLW9 94 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 GOSR2O14653 212 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 HYAL3O43820 417 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 HPP00738 406 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 KLK1P06870 262 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 GNSP15586 552 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF19P17023 458 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 NFYBP25208 207 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF528Q3MIS6 628 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CCSMST1Q4G0I0 132 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 TAPT1Q6NXT6 567 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 LRRC70Q7Z2Q7 622 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CMIPQ8IY22 773 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF433Q8N7K0 673 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 L3MBTL4Q8NA19 623 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 OR52N1Q8NH53 320 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 TNFAIP8L1Q8WVP5 186 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 KLK6Q92876 244 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 FAM46AQ96IP4 442 aaKnown RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 REEP4Q9H6H4 257 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 FGF20Q9NP95 211 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ASF1BQ9NVP2 202 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 MYEF2Q9P2K5 600 aaKnown RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 DHCR7Q9UBM7 475 aaKnown RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 UGT2B7P16662 529 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ATF1P18846 271 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 PAICSP22234 425 aaKnown RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 RPS12P25398 132 aaKnown RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 BLOC1S1P78537 153 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 VGLL4Q14135 290 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 PRSS53Q2L4Q9 553 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 LINC00303Q3SY05 128 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 MINDY4Q4G0A6 757 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 DCAF12L2Q5VW00 463 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 SLC22A10Q63ZE4 541 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CDC73Q6P1J9 531 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF322Q6U7Q0 402 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 COMTD1Q86VU5 262 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CPOQ8IVL8 374 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 OR6S1Q8NH40 331 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 SORCS1Q8WY21 1168 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms