RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CTHRC1Q96CG8 243 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 DIRAS2Q96HU8 199 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 C20orf141Q9NUB4 165 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 C14orf105Q9NVL8 296 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 HRASLS2Q9NWW9 162 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 ASB6Q9NWX5 421 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 FBXL21Q9UKT6 434 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 POLHQ9Y253 713 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 TMEM5Q9Y2B1 443 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 ARHGEF17Q96PE2 2063 aaPredicted RBP17.24■□□□□ 0.35
CLK1-205ENST00000434813 NPIPA5A0A0B4J1W7 369 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 TCRBV21S2A2A0A5A6 115 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 FABP12A6NFH5 140 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 NPIPA7E9PJI5 369 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 CT62P0C5K7 136 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 NPIPA8P0DM63 369 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 IFI30P13284 250 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 TBXA2RP21731 343 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 ATP6V1E1P36543 226 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 RABIFP47224 123 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 POU6F2P78424 691 aaPredicted RBP17.23■□□□□ 0.35
CLK1-205ENST00000434813 PLAURQ03405 335 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 SCN1BQ07699 218 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 FZD5Q13467 585 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 ASAH1Q13510 395 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 EXOSC7Q15024 291 aaKnown RBP17.23■□□□□ 0.35
CLK1-205ENST00000434813 KCNJ8Q15842 424 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 VASNQ6EMK4 673 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 LNX2Q8N448 690 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 HOXB13Q92826 284 aaPredicted RBP17.23■□□□□ 0.35
CLK1-205ENST00000434813 EVA1AQ9H8M9 152 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 TIGARQ9NQ88 270 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 MMP17Q9ULZ9 603 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 KIR2DS5A0A0G2JLQ3 304 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 A0A0G2JNG1 304 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 FAM183AA6NL82 134 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 KIR2DS3K7RE56 304 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 CASKO14936 926 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 SEC14L5O43304 696 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 SEMA4FO95754 770 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 GABRG2P18507 467 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 CELP19835 753 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 GALP22466 123 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 OR2B6P58173 313 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 PPP3R1P63098 170 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 CCINQ13939 588 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 KIR2DS5Q14953 304 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 GARNL3Q5VVW2 1013 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 PLBD1Q6P4A8 553 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 FIGNL1Q6PIW4 674 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 TMPRSS11FQ6ZWK6 438 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 SLC37A2Q8TED4 501 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 DNAJA4Q8WW22 397 aaPredicted RBP17.23■□□□□ 0.35
CLK1-205ENST00000434813 GUCD1Q96NT3 240 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 DCLRE1CQ96SD1 692 aaKnown RBP17.23■□□□□ 0.35
CLK1-205ENST00000434813 TMED9Q9BVK6 235 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 GSDMCQ9BYG8 508 aa17.23■□□□□ 0.35
CLK1-205ENST00000434813 OR5K4A6NMS3 321 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 GABRPO00591 440 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 POLR1CO15160 346 aaPredicted RBP17.22■□□□□ 0.35
CLK1-205ENST00000434813 NKX2-2O95096 273 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 RCBTB2O95199 551 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 FOSL2P15408 326 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 BMP7P18075 431 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 FUT1P19526 365 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 PAICSP22234 425 aaKnown RBP17.22■□□□□ 0.35
CLK1-205ENST00000434813 RAB38P57729 211 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 ZNF613Q6PF04 617 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 UBQLNLQ8IYU4 475 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 OR51G2Q8NGK0 314 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 ANKRD9Q96BM1 317 aaPredicted RBP17.22■□□□□ 0.35
CLK1-205ENST00000434813 TCEAL2Q9H3H9 227 aaPredicted RBP17.22■□□□□ 0.35
CLK1-205ENST00000434813 TBC1D17Q9HA65 648 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 ATP13A2Q9NQ11 1180 aa17.22■□□□□ 0.35
CLK1-205ENST00000434813 NDRG2Q9UN36 371 aaKnown RBP17.22■□□□□ 0.35
CLK1-205ENST00000434813 GXYLT2A0PJZ3 443 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 SMIM30A4D0T7 59 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 CBX7O95931 251 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 CSF3P09919 207 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 GABRA3P34903 492 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 AMZ1Q400G9 498 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 ZNF544Q6NX49 715 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 ZNF517Q6ZMY9 492 aaPredicted RBP17.21■□□□□ 0.35
CLK1-205ENST00000434813 MEPCEQ7L2J0 689 aaKnown RBP17.21■□□□□ 0.35
CLK1-205ENST00000434813 MARCH9Q86YJ5 346 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 CAMKK1Q8N5S9 505 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 ACBD7Q8N6N7 88 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 ATP6V1C2Q8NEY4 427 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 NEIL3Q8TAT5 605 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 NEDD4LQ96PU5 975 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 CCDC3Q9BQI4 270 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 ZNF559Q9BR84 538 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 CMC2Q9NRP2 79 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 PRAMEF26H0Y7S4 382 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 TMCC2O75069 709 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 COQ9O75208 318 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 HTR3AP46098 478 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 CTBP2P56545 445 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 VSX2P58304 361 aaPredicted RBP17.21■□□□□ 0.35
CLK1-205ENST00000434813 KLBQ86Z14 1044 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms